Strain Fitness in Pseudomonas simiae WCS417 around PS417_21430

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
4,652,720	+				+0.2
4,652,720	+				+0.3
4,652,720	+				+0.1
4,652,720	+				+0.3
4,652,720	+				-0.9
4,652,720	+				-0.2
4,652,721	-				+0.2
4,652,721	-				+0.3
4,652,721	-				+0.2
4,653,015	+		PS417_21425	0.33	-0.3
4,653,228	-		PS417_21425	0.60	-0.1
4,653,493	+				+2.5
4,653,903	+		PS417_21430	0.28	+0.0
4,653,904	-		PS417_21430	0.28	-3.0
4,654,310	-		PS417_21430	0.60	-0.8
4,654,330	-		PS417_21430	0.62	-0.1
4,654,379	-		PS417_21430	0.66	+0.0
4,654,846	-				-0.3
4,655,221	-				+0.1
4,655,221	-				-0.4
4,655,223	-				-0.3
4,655,286	-				-0.5
4,655,291	-				+0.1
4,655,291	-				+0.3
4,655,327	-				-1.5
4,655,360	-				-0.8
4,655,369	-				+0.5
4,655,369	-				+0.8
4,655,369	-				-0.6
4,655,369	-				+0.2
4,655,369	-				-0.1