Strain Fitness in Pseudomonas simiae WCS417 around PS417_21360

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
4,639,922	-		PS417_21345	0.84	+0.4
4,640,028	+				-0.1
4,640,028	+				+2.2
4,640,029	-				-1.3
4,640,029	-				+0.2
4,640,029	-				+0.3
4,640,029	-				-0.1
4,640,029	-				+1.5
4,640,029	-				-0.7
4,640,029	-				+0.3
4,640,029	-				-0.2
4,640,029	-				+0.2
4,640,029	-				+0.5
4,640,031	+				-0.2
4,640,031	+				+0.4
4,640,031	+				+0.0
4,640,031	+				-0.1
4,640,151	+				-0.0
4,640,154	+				+0.1
4,640,154	+				-0.8
4,640,155	-				-0.2
4,640,155	-				+1.3
4,640,158	+				+0.0
4,640,159	-				-0.7
4,640,167	+				-0.5
4,640,174	-				+0.6
4,640,567	+				+0.6
4,640,662	+		PS417_21355	0.34	+0.3
4,640,758	+		PS417_21355	0.70	-0.0
4,640,836	+				+0.5
4,640,915	-				+0.5
4,641,209	+		PS417_21360	0.84	-1.3
4,641,459	+		PS417_21365	0.15	-0.1
4,641,459	+		PS417_21365	0.15	-0.1
4,641,460	-		PS417_21365	0.15	-0.2
4,641,464	-		PS417_21365	0.15	+0.6
4,641,700	+		PS417_21365	0.41	-0.4
4,641,704	-		PS417_21365	0.42	+0.3
4,641,831	+		PS417_21365	0.55	-0.1
4,641,831	+		PS417_21365	0.55	-1.8
4,641,831	+		PS417_21365	0.55	-0.8
4,641,845	+		PS417_21365	0.57	-0.4
4,641,845	+		PS417_21365	0.57	-0.4
4,641,845	+		PS417_21365	0.57	-0.0
4,641,845	+		PS417_21365	0.57	+0.5
4,641,846	-		PS417_21365	0.57	+0.2
4,641,846	-		PS417_21365	0.57	-0.5
4,641,846	-		PS417_21365	0.57	+0.0
4,641,846	-		PS417_21365	0.57	-0.6
4,641,846	-		PS417_21365	0.57	+1.5
4,641,846	-				+1.0
4,641,846	-		PS417_21365	0.57	-0.5
4,641,847	+		PS417_21365	0.57	-0.3
4,641,847	+		PS417_21365	0.57	+0.5
4,641,847	+		PS417_21365	0.57	-0.9
4,641,847	+		PS417_21365	0.57	+0.2
4,641,847	+		PS417_21365	0.57	-1.8
4,641,847	+		PS417_21365	0.57	+0.4
4,641,847	+		PS417_21365	0.57	+0.6
4,641,848	-		PS417_21365	0.57	-0.4
4,641,848	-		PS417_21365	0.57	+0.2
4,641,848	-		PS417_21365	0.57	-0.8
4,641,848	-		PS417_21365	0.57	+0.5
4,641,848	-		PS417_21365	0.57	-0.5
4,641,851	+		PS417_21365	0.58	+0.4
4,641,851	+		PS417_21365	0.58	-0.0
4,641,851	+		PS417_21365	0.58	-0.3
4,641,851	+		PS417_21365	0.58	+0.3
4,641,852	-		PS417_21365	0.58	+0.7
4,641,852	-		PS417_21365	0.58	-0.2
4,642,074	-		PS417_21365	0.82	-0.3
4,642,183	-				+0.0
4,642,233	+				-0.3
4,642,234	-				-0.8
4,642,250	+				-0.5