Strain Fitness in Pseudomonas simiae WCS417 around PS417_19580

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
4,258,143	+		PS417_19575	0.69	+0.4
4,258,143	+		PS417_19575	0.69	-0.8
4,258,377	+				+0.8
4,258,644	+		PS417_19580	0.14	-1.3
4,258,872	+		PS417_19580	0.28	-0.5
4,258,873	-		PS417_19580	0.28	-0.6
4,258,989	+		PS417_19580	0.36	-0.2
4,258,990	-		PS417_19580	0.36	-0.7
4,259,313	+		PS417_19580	0.56	-0.2
4,259,489	+		PS417_19580	0.67	+0.1
4,259,661	+		PS417_19580	0.77	-1.7
4,259,676	+				-1.0
4,259,676	+				+1.4
4,259,677	-		PS417_19580	0.78	-1.1
4,259,889	+				+0.3
4,260,017	-				+1.2
4,260,235	+		PS417_19585	0.17	-0.1
4,260,235	+		PS417_19585	0.17	+0.4
4,260,236	-		PS417_19585	0.17	+0.7
4,260,236	-		PS417_19585	0.17	+0.4
4,260,236	-		PS417_19585	0.17	-0.1
4,260,241	+		PS417_19585	0.17	+1.5
4,260,242	-		PS417_19585	0.17	+0.0
4,260,308	+		PS417_19585	0.23	-0.2
4,260,309	-		PS417_19585	0.23	-0.5
4,260,485	-		PS417_19585	0.38	-0.0
4,260,485	-		PS417_19585	0.38	-0.2
4,260,485	-		PS417_19585	0.38	+0.2
4,260,790	-		PS417_19585	0.65	+0.7
4,260,958	+		PS417_19585	0.79	+0.2
4,260,959	-		PS417_19585	0.79	-0.1
4,260,959	-		PS417_19585	0.79	+0.9