Strain Fitness in Pseudomonas simiae WCS417 around PS417_17815

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
3,888,869	+				+0.0
3,888,966	+				+1.0
3,888,967	-				-0.7
3,888,977	+				-0.5
3,889,002	-				-0.1
3,889,543	+				+0.3
3,889,690	+				-0.6
3,889,691	-				-1.7
3,890,108	+				+0.3
3,890,108	+				-0.0
3,890,109	-				+0.2
3,890,135	-				+1.6
3,890,167	+				-0.6
3,890,279	+				+0.4
3,890,301	+				+0.2
3,890,308	+				-1.0
3,890,363	+				+0.9
3,890,364	-				-0.0
3,890,431	-		PS417_17820	0.12	+0.0
3,890,490	-		PS417_17820	0.14	+1.4
3,890,490	-		PS417_17820	0.14	-0.6
3,890,545	-				+0.2
3,890,546	+		PS417_17820	0.16	+0.4
3,890,546	+		PS417_17820	0.16	+0.2
3,890,546	+		PS417_17820	0.16	-0.4
3,890,638	+		PS417_17820	0.20	+0.4
3,890,779	-				+1.4
3,890,841	+		PS417_17820	0.28	-1.8
3,890,842	-		PS417_17820	0.28	-0.1
3,890,951	+		PS417_17820	0.32	+0.3
3,890,969	+		PS417_17820	0.33	+0.2
3,890,969	+		PS417_17820	0.33	-0.1