Strain Fitness in Pseudomonas simiae WCS417 around PS417_17610

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
3,842,896	+		PS417_17600	0.88	+1.4
3,842,896	+		PS417_17600	0.88	+0.2
3,842,897	-		PS417_17600	0.88	+0.6
3,842,897	-		PS417_17600	0.88	-0.7
3,843,413	+		PS417_17605	0.51	-0.4
3,843,448	+		PS417_17605	0.56	+0.2
3,843,448	+		PS417_17605	0.56	-0.8
3,843,448	+		PS417_17605	0.56	-0.2
3,843,449	-		PS417_17605	0.56	+0.4
3,843,609	-		PS417_17605	0.75	-1.1
3,843,630	-		PS417_17605	0.77	-0.1
3,843,630	-		PS417_17605	0.77	+0.3
3,843,655	-		PS417_17605	0.81	+0.0
3,843,655	-		PS417_17605	0.81	-0.0
3,843,655	-		PS417_17605	0.81	+0.3
3,843,918	+		PS417_17610	0.19	-1.2
3,844,174	-		PS417_17610	0.71	-1.9
3,844,259	+		PS417_17610	0.88	+0.2
3,844,325	-				-0.5
3,844,519	+		PS417_17615	0.24	+0.6
3,844,523	-		PS417_17615	0.24	-1.1
3,844,523	-		PS417_17615	0.24	+0.2
3,844,624	+		PS417_17615	0.36	-0.5
3,844,624	+		PS417_17615	0.36	+1.2
3,844,625	-				+1.8
3,844,736	-		PS417_17615	0.50	-1.4
3,844,909	+		PS417_17615	0.71	+0.3
3,844,909	+		PS417_17615	0.71	-1.0
3,844,910	-		PS417_17615	0.71	+0.4
3,844,939	+		PS417_17615	0.74	+0.4
3,845,279	+		PS417_17620	0.11	+1.0