Strain Fitness in Pseudomonas simiae WCS417 around PS417_17350

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
3,789,152	+				-0.0
3,789,280	-		PS417_17340	0.28	-1.2
3,789,280	-		PS417_17340	0.28	+0.4
3,789,280	-		PS417_17340	0.28	-0.1
3,789,312	+		PS417_17340	0.35	+0.2
3,789,312	+		PS417_17340	0.35	+0.2
3,789,312	+				+0.0
3,789,495	+				-1.0
3,789,495	+		PS417_17340	0.74	+0.1
3,789,600	-				-2.8
3,789,600	-				-0.5
3,789,779	-		PS417_17345	0.47	+1.0
3,789,862	-		PS417_17345	0.69	+0.2
3,789,896	+		PS417_17345	0.79	-0.2
3,789,897	-		PS417_17345	0.79	+0.0
3,789,897	-		PS417_17345	0.79	-0.1
3,789,897	-		PS417_17345	0.79	-1.9
3,789,950	+				+0.0
3,789,950	+				-0.4
3,790,260	+		PS417_17350	0.33	-0.5
3,790,273	-		PS417_17350	0.34	-1.8
3,790,404	+		PS417_17350	0.50	-0.9
3,790,404	+		PS417_17350	0.50	-0.1
3,790,405	-		PS417_17350	0.50	-0.7
3,790,822	+				-0.4
3,790,862	-				-0.8
3,790,988	-				+0.1
3,791,064	+				+1.0
3,791,157	+				-0.2
3,791,791	+		PS417_17355	0.55	-0.2
3,791,791	+		PS417_17355	0.55	-0.0
3,791,792	-		PS417_17355	0.55	+0.0