Strain Fitness in Pseudomonas simiae WCS417 around PS417_17215

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
3,759,364	+		PS417_17210	0.76	+0.2
3,759,365	-		PS417_17210	0.76	+0.0
3,759,404	+		PS417_17210	0.79	+0.5
3,759,404	+		PS417_17210	0.79	+0.1
3,759,569	+				+0.0
3,759,569	+				+0.7
3,759,570	-				+0.1
3,759,570	-				-1.7
3,759,570	-				-0.3
3,759,657	+				-0.1
3,759,714	-				+0.7
3,759,833	+				-0.2
3,759,834	-				+0.3
3,759,834	-				+0.2
3,760,025	-				+0.0
3,760,025	-				+0.1
3,760,119	+				-0.0
3,760,119	+				+0.6
3,760,120	-				-0.5
3,760,120	-				+0.2
3,760,154	+				-1.7
3,760,165	+				-0.7
3,761,087	+		PS417_17215	0.46	-0.5
3,761,087	+		PS417_17215	0.46	-0.8
3,761,337	-		PS417_17215	0.59	-1.5
3,761,456	+		PS417_17215	0.66	-2.7
3,761,460	-		PS417_17215	0.66	-1.5
3,761,803	+		PS417_17215	0.84	-1.9
3,761,804	-		PS417_17215	0.84	-2.1
3,761,979	+				+0.2
3,761,979	+				-2.0
3,762,087	+				-2.0
3,762,164	-				+0.2
3,762,165	+				-0.3
3,762,165	+				-2.4
3,762,165	+				-1.9
3,762,165	+				-1.2
3,762,166	-				+0.9
3,762,166	-				+0.7
3,762,166	-				-0.1
3,762,166	-				+0.9
3,762,166	-				+0.5
3,762,255	+				-1.7
3,762,255	+				-0.6
3,762,256	-				+2.2
3,762,256	-				+1.4
3,762,256	-				+1.8
3,762,256	-				+0.7
3,762,256	-				+0.9
3,762,294	-				+0.7
3,762,294	-				+0.9
3,762,312	+				-1.1
3,762,313	-				+0.5
3,762,313	-				+0.7
3,762,331	-				+0.0
3,762,615	-				+1.6
3,762,619	-				+1.5
3,762,688	-				-0.7
3,762,688	-				-0.7
3,762,700	-				+0.1
3,762,744	-				+0.6
3,762,761	+				-2.0