Strain Fitness in Pseudomonas simiae WCS417 around PS417_17125

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
3,738,809	-		PS417_17120	0.42	-0.5
3,738,976	+		PS417_17120	0.55	-1.0
3,738,976	+		PS417_17120	0.55	-1.2
3,739,183	+		PS417_17120	0.71	-0.1
3,739,184	-		PS417_17120	0.71	+1.8
3,739,184	-		PS417_17120	0.71	-2.3
3,739,291	+		PS417_17120	0.79	-1.9
3,739,302	+		PS417_17120	0.80	-0.4
3,739,681	+				-0.0
3,739,801	+		PS417_17125	0.17	-1.2
3,739,801	+		PS417_17125	0.17	-0.8
3,739,802	-		PS417_17125	0.17	-0.5
3,740,075	+		PS417_17125	0.56	-1.3
3,740,140	+		PS417_17125	0.65	-1.3
3,740,360	+				+1.6
3,740,452	-				+0.3
3,740,470	-				-2.0
3,740,654	+		PS417_17130	0.12	+0.8
3,741,035	+		PS417_17130	0.41	+0.5
3,741,036	-		PS417_17130	0.41	-0.0
3,741,252	+		PS417_17130	0.57	+0.0
3,741,297	+		PS417_17130	0.60	+0.8
3,741,329	+		PS417_17130	0.63	+1.8
3,741,329	+				-0.6
3,741,330	-		PS417_17130	0.63	+2.9
3,741,378	-		PS417_17130	0.66	-0.8
3,741,378	-		PS417_17130	0.66	-0.2