Strain Fitness in Pseudomonas simiae WCS417 around PS417_17035

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
3,722,804	+		PS417_17030	0.82	+0.7
3,723,466	+		PS417_17035	0.51	-1.1
3,723,467	-				-0.3
3,723,785	+				-0.2
3,723,821	-				+0.5
3,723,824	-				-0.6
3,723,844	+				-0.3
3,723,844	+				-0.5
3,723,853	+				-0.1
3,723,853	+				-0.3
3,723,853	+				-0.3
3,723,854	-				-0.8
3,723,856	+				-0.5
3,723,857	-				+0.6
3,723,857	-				-0.1
3,723,868	+				-1.3
3,723,869	-				-0.4
3,723,894	+				+0.7
3,723,894	+				-0.9
3,723,920	+				+1.9
3,723,963	+		PS417_17040	0.17	+0.7
3,723,963	+		PS417_17040	0.17	+0.4
3,724,002	-		PS417_17040	0.28	-0.2
3,724,002	-		PS417_17040	0.28	-0.5
3,724,002	-		PS417_17040	0.28	+1.0
3,724,127	+		PS417_17040	0.63	+1.0
3,724,184	+		PS417_17040	0.79	-0.3
3,724,184	+		PS417_17040	0.79	+1.0
3,724,185	-		PS417_17040	0.80	-0.7
3,724,279	-				+0.3
3,724,370	+				-0.8
3,724,370	+				-0.4
3,724,371	-				-1.7
3,724,371	-				-0.4
3,724,388	+				+0.1
3,724,601	+				-0.7
3,724,680	+				-0.4
3,724,680	+				-1.5
3,724,681	-				-0.4
3,724,681	-				+0.8
3,724,683	+				-0.1
3,724,684	-				+0.9
3,724,686	-				+0.1
3,724,686	-				+0.6
3,724,704	-				-0.3
3,724,704	-				-1.1
3,724,720	+				-0.1
3,724,721	-				-1.0
3,724,721	-				-0.2