Strain Fitness in Pseudomonas simiae WCS417 around PS417_16710

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
3,645,787	+		PS417_16700	0.35	+0.1
3,645,839	-		PS417_16700	0.41	-0.4
3,645,880	-		PS417_16700	0.46	-0.3
3,645,880	-		PS417_16700	0.46	-0.3
3,645,973	-		PS417_16700	0.58	+1.3
3,646,174	+		PS417_16700	0.82	+0.6
3,646,175	-		PS417_16700	0.82	-0.0
3,646,387	-				-0.1
3,646,681	+				+0.0
3,646,681	+				-0.8
3,646,741	+				-0.5
3,646,741	+				+0.8
3,646,792	+		PS417_16710	0.15	+0.5
3,646,792	+		PS417_16710	0.15	-1.7
3,646,881	+		PS417_16710	0.26	-1.4
3,647,269	+				+1.7
3,647,269	+		PS417_16710	0.77	+1.5
3,647,435	+				-0.8
3,647,435	+				-0.1
3,647,435	+				-0.3
3,647,436	-				-0.5
3,647,436	-				-0.5
3,647,572	+		PS417_16715	0.27	+0.5
3,647,709	+		PS417_16715	0.61	-0.5
3,647,722	+		PS417_16715	0.64	-0.1
3,647,955	+		PS417_16720	0.33	-0.6
3,648,163	+				-0.7
3,648,275	+				+0.6
3,648,276	-				+0.8
3,648,312	+		PS417_16725	0.23	+0.6
3,648,364	-				-1.7
3,648,367	+		PS417_16725	0.50	+0.7
3,648,367	+		PS417_16725	0.50	-0.2
3,648,367	+		PS417_16725	0.50	-0.7
3,648,367	+		PS417_16725	0.50	-0.7
3,648,368	-		PS417_16725	0.51	+0.1
3,648,368	-		PS417_16725	0.51	+1.0
3,648,368	-		PS417_16725	0.51	-3.1
3,648,368	-		PS417_16725	0.51	+1.9
3,648,368	-		PS417_16725	0.51	-0.2
3,648,371	+		PS417_16725	0.52	-0.0
3,648,372	-		PS417_16725	0.53	+0.3
3,648,372	-		PS417_16725	0.53	+0.6
3,648,373	+		PS417_16725	0.53	-0.2