Strain Fitness in Pseudomonas simiae WCS417 around PS417_16465

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
3,595,375	+		PS417_16460	0.17	+0.7
3,595,376	-		PS417_16460	0.17	+0.2
3,595,376	-		PS417_16460	0.17	-1.2
3,595,455	-		PS417_16460	0.25	+0.3
3,595,698	+		PS417_16460	0.49	+0.3
3,595,760	-		PS417_16460	0.56	+1.3
3,595,781	+		PS417_16460	0.58	-0.9
3,595,817	-		PS417_16460	0.61	+0.6
3,595,900	+		PS417_16460	0.70	-1.0
3,595,900	+		PS417_16460	0.70	+0.3
3,595,919	+		PS417_16460	0.71	-2.8
3,595,919	+		PS417_16460	0.71	-0.5
3,595,920	-		PS417_16460	0.72	-0.3
3,595,957	+		PS417_16460	0.75	+0.7
3,595,957	+		PS417_16460	0.75	-0.0
3,595,957	+		PS417_16460	0.75	-0.0
3,595,957	+		PS417_16460	0.75	+0.1
3,595,958	-		PS417_16460	0.75	-1.0
3,595,960	+		PS417_16460	0.76	+2.0
3,595,960	+		PS417_16460	0.76	+0.2
3,595,961	-		PS417_16460	0.76	+0.3
3,595,961	-		PS417_16460	0.76	-0.3
3,596,032	+		PS417_16460	0.83	+0.3
3,596,032	+		PS417_16460	0.83	-0.5
3,596,032	+		PS417_16460	0.83	-0.4
3,596,032	+		PS417_16460	0.83	-0.8
3,596,033	-		PS417_16460	0.83	+0.7
3,596,033	-		PS417_16460	0.83	+0.5
3,596,033	-		PS417_16460	0.83	-0.2
3,596,033	-		PS417_16460	0.83	-0.4
3,596,033	-		PS417_16460	0.83	+0.2
3,596,033	-		PS417_16460	0.83	-0.1
3,596,033	-		PS417_16460	0.83	+0.5
3,596,033	-		PS417_16460	0.83	+0.3
3,596,086	+		PS417_16460	0.88	-0.5
3,596,087	-		PS417_16460	0.88	-0.8
3,596,087	-		PS417_16460	0.88	-0.7
3,596,089	+		PS417_16460	0.89	+0.3
3,596,090	-		PS417_16460	0.89	-0.5
3,596,090	-		PS417_16460	0.89	+0.1
3,596,090	-		PS417_16460	0.89	-0.3
3,596,090	-		PS417_16460	0.89	+0.1
3,596,273	+				-1.5
3,596,447	-				-1.5
3,596,558	+		PS417_16465	0.18	-1.9
3,596,558	+		PS417_16465	0.18	-2.2
3,596,558	+		PS417_16465	0.18	-4.3
3,596,587	+		PS417_16465	0.20	-1.5
3,596,587	+		PS417_16465	0.20	-3.7
3,596,588	-		PS417_16465	0.20	-2.9
3,596,588	-		PS417_16465	0.20	-1.0
3,596,637	+		PS417_16465	0.24	+0.5
3,596,688	-		PS417_16465	0.27	-2.0
3,596,688	-		PS417_16465	0.27	-2.9
3,597,047	+		PS417_16465	0.53	-4.5
3,597,048	-		PS417_16465	0.53	-4.5
3,597,251	+		PS417_16465	0.68	-2.0
3,597,251	+		PS417_16465	0.68	-2.4
3,597,252	-		PS417_16465	0.68	-2.8
3,597,252	-		PS417_16465	0.68	-1.0