Strain Fitness in Pseudomonas simiae WCS417 around PS417_01605

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
353,067	+		PS417_01600	0.67	-0.5
353,068	-		PS417_01600	0.67	-0.2
353,074	-		PS417_01600	0.68	-0.9
353,076	+		PS417_01600	0.68	+1.2
353,077	-		PS417_01600	0.68	-0.3
353,077	-		PS417_01600	0.68	-0.6
353,077	-		PS417_01600	0.68	+0.2
353,401	+				+1.5
353,494	+				-1.3
353,527	+				+0.8
353,528	-				+0.1
353,528	-				-0.2
353,528	-				-0.1
353,528	-				+0.1
353,531	-				+0.6
353,531	-				+1.2
353,531	-				+0.9
353,531	-				+0.6
353,583	+				-0.2
353,584	-				-2.2
353,584	-				-1.5
353,584	-				+1.5
353,604	-				+0.3
353,620	+				+0.6
353,621	-				+0.3
353,621	-				-1.1
353,621	-				-0.2
353,632	+				-1.2
353,633	-				+1.2
353,705	+				+0.3
353,706	-				+0.3
354,097	+		PS417_01605	0.22	-1.5
354,098	-		PS417_01605	0.23	-1.0
354,670	+		PS417_01605	0.60	-1.1
355,048	+		PS417_01605	0.85	+0.4
355,281	-				-0.9
355,281	-				-1.3
355,281	-				-0.3
355,281	-				+1.3
355,301	+				-1.5
355,394	+				+0.3
355,394	+				+0.1
355,396	+				-0.7
355,396	+				+0.1
355,396	+				-1.2
355,846	+				+1.1
355,846	+				-0.1
356,107	-				+2.3
356,113	+				-0.3
356,209	+		PS417_01620	0.14	-1.1
356,209	+		PS417_01620	0.14	-0.5