Strain Fitness in Pseudomonas simiae WCS417 around PS417_14295

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
3,127,663	+		PS417_14290	0.63	+0.0
3,127,672	+		PS417_14290	0.64	-0.5
3,127,786	+		PS417_14290	0.69	-0.0
3,127,786	+		PS417_14290	0.69	+0.3
3,127,787	-		PS417_14290	0.69	+0.3
3,127,921	+		PS417_14290	0.76	+0.1
3,127,921	+		PS417_14290	0.76	+0.6
3,127,922	-		PS417_14290	0.76	-0.3
3,128,259	-				-0.0
3,128,432	+				-1.5
3,128,445	-				+0.1
3,128,464	+				-0.3
3,128,464	+				+0.3
3,128,464	+				-0.2
3,128,464	+				-0.7
3,128,465	-				-0.4
3,128,465	-				+0.4
3,128,465	-				-2.3
3,128,570	+				-1.1
3,128,570	+				+0.5
3,128,570	+				-0.2
3,128,571	-				+0.0
3,129,026	+		PS417_14295	0.51	-1.7
3,129,027	-		PS417_14295	0.51	-0.2
3,129,313	+		PS417_14295	0.89	-0.8
3,129,314	-		PS417_14295	0.89	-1.2
3,129,334	+				-0.6
3,129,334	+				+0.1
3,129,335	-				+0.1
3,129,538	+				-0.0
3,129,583	+				-0.5
3,129,583	+				-0.1
3,129,583	+				-0.7
3,129,767	+		PS417_14300	0.11	+0.5
3,129,768	-		PS417_14300	0.11	+0.0
3,129,921	-		PS417_14300	0.21	-0.1
3,130,075	-		PS417_14300	0.30	-2.2
3,130,217	+		PS417_14300	0.39	+0.5
3,130,323	-		PS417_14300	0.46	+0.8