Strain Fitness in Pseudomonas simiae WCS417 around PS417_14240

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
3,116,475	-				+0.1
3,116,562	+				+0.0
3,116,563	-				-0.5
3,116,612	+				-0.7
3,116,775	-				-0.1
3,116,858	+				-1.7
3,116,859	-				+2.3
3,117,046	-		PS417_14235	0.27	-0.7
3,117,046	-		PS417_14235	0.27	-0.4
3,117,126	+		PS417_14235	0.68	-1.8
3,117,143	-		PS417_14235	0.76	+0.5
3,117,207	-				+0.2
3,117,207	-				+0.8
3,117,227	+				+0.3
3,117,228	-				+1.6
3,117,243	+				-0.3
3,117,243	+				-0.0
3,117,244	-				-0.8
3,117,244	-				-0.3
3,117,268	-				-0.3
3,117,341	+				+0.1
3,117,344	-				-0.0
3,117,353	+				-0.1
3,117,393	+				-0.9
3,117,393	+				-0.3
3,117,394	-				+0.1
3,117,394	-				-0.4
3,117,913	-		PS417_14240	0.77	-0.8
3,117,913	-		PS417_14240	0.77	-0.7
3,117,913	-		PS417_14240	0.77	+0.1
3,117,914	+		PS417_14240	0.78	-2.4
3,117,914	+		PS417_14240	0.78	-0.8
3,117,938	+				-0.9
3,118,047	+				-0.1
3,118,427	+		PS417_14245	0.57	-0.5
3,118,427	+		PS417_14245	0.57	+2.6
3,118,427	+		PS417_14245	0.57	-0.3
3,118,428	-		PS417_14245	0.57	+0.3
3,118,748	+				+0.6
3,118,748	+				+0.1
3,118,749	-				+0.1
3,118,795	+		PS417_14250	0.16	-0.1
3,118,912	+		PS417_14250	0.33	-0.8
3,118,980	+		PS417_14250	0.43	-0.0
3,118,981	-		PS417_14250	0.43	-1.6
3,118,981	-		PS417_14250	0.43	-2.3
3,118,985	-		PS417_14250	0.44	+0.2
3,118,985	-		PS417_14250	0.44	-1.3
3,118,985	-		PS417_14250	0.44	-0.5
3,119,032	+		PS417_14250	0.50	+0.8
3,119,041	+		PS417_14250	0.52	-0.2
3,119,042	-		PS417_14250	0.52	-1.1