Strain Fitness in Pseudomonas simiae WCS417 around PS417_13480

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
2,967,425	-		PS417_13475	0.69	-0.2
2,967,724	+		PS417_13475	0.79	-0.2
2,967,809	+		PS417_13475	0.82	+0.6
2,967,949	+		PS417_13475	0.87	+0.0
2,967,949	+		PS417_13475	0.87	+1.0
2,967,949	+		PS417_13475	0.87	-1.8
2,967,949	+		PS417_13475	0.87	+0.2
2,967,949	+		PS417_13475	0.87	-0.4
2,968,277	-				+0.2
2,968,277	-				+0.8
2,968,277	-				+0.1
2,968,352	+				+0.0
2,968,353	-				-0.4
2,968,366	-				+1.1
2,968,394	-				-0.2
2,968,410	+				+0.5
2,968,414	+				+0.6
2,968,470	-				-0.4
2,968,480	-				+0.2
2,968,523	+				-0.6
2,968,523	+				+0.1
2,968,524	-				-0.4
2,968,619	+				-2.2
2,968,620	-				+0.8
2,968,745	+		PS417_13480	0.11	+0.0
2,968,746	-		PS417_13480	0.12	-0.2
2,968,757	+		PS417_13480	0.12	-1.4
2,968,982	+		PS417_13480	0.19	-0.5
2,968,982	+		PS417_13480	0.19	-0.8
2,968,982	+		PS417_13480	0.19	+0.9
2,968,983	-		PS417_13480	0.19	-0.4
2,968,983	-		PS417_13480	0.19	+0.7
2,969,235	-		PS417_13480	0.27	-0.7
2,969,354	+		PS417_13480	0.31	-0.1
2,969,365	+		PS417_13480	0.31	+0.1
2,969,429	+		PS417_13480	0.33	-0.2
2,969,430	-		PS417_13480	0.33	+0.2
2,969,430	-		PS417_13480	0.33	-0.2
2,969,555	+				-4.9
2,969,769	+				-0.3
2,969,899	-				-0.5
2,969,914	+		PS417_13480	0.49	+0.8
2,969,915	-		PS417_13480	0.49	-0.1
2,969,918	+		PS417_13480	0.49	-1.9
2,970,272	+		PS417_13480	0.61	-1.2
2,970,273	-		PS417_13480	0.61	+0.4
2,970,332	+		PS417_13480	0.62	+0.2
2,970,332	+		PS417_13480	0.62	+0.2
2,970,333	-		PS417_13480	0.63	-0.2
2,970,333	-		PS417_13480	0.63	+0.1
2,970,333	-		PS417_13480	0.63	+1.6
2,970,333	-		PS417_13480	0.63	+1.3
2,970,485	+		PS417_13480	0.67	+0.2
2,970,486	-		PS417_13480	0.67	+0.2
2,970,557	+		PS417_13480	0.70	-0.7
2,970,597	-		PS417_13480	0.71	+0.2
2,970,600	+		PS417_13480	0.71	+0.2
2,970,601	-		PS417_13480	0.71	+0.8
2,970,739	+		PS417_13480	0.76	-0.3
2,970,739	+		PS417_13480	0.76	-0.1
2,970,941	+		PS417_13480	0.82	-0.4
2,971,103	+		PS417_13480	0.87	-0.3
2,971,103	+		PS417_13480	0.87	-0.0
2,971,104	-		PS417_13480	0.87	-0.3
2,971,104	-		PS417_13480	0.87	-0.4
2,971,506	+				-0.8
2,971,506	+				-0.8
2,971,506	+				+0.3
2,971,507	-				+0.9
2,971,553	+				-0.3
2,971,565	+				+0.4
2,971,626	+				-0.0
2,971,633	-				+0.7
2,971,700	+		PS417_13485	0.11	-1.1
2,971,700	+		PS417_13485	0.11	-0.2
2,971,798	+		PS417_13485	0.18	-0.9
2,971,894	-				+1.0
2,971,894	-		PS417_13485	0.24	+1.7
2,972,244	+		PS417_13485	0.49	+0.7
2,972,245	-		PS417_13485	0.49	+0.0
2,972,245	-		PS417_13485	0.49	+0.1
2,972,254	-		PS417_13485	0.50	-0.9
2,972,400	-		PS417_13485	0.60	-0.6