Strain Fitness in Pseudomonas simiae WCS417 around PS417_12565

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
2,733,002	+		PS417_12560	0.27	+0.8
2,733,003	-		PS417_12560	0.27	-0.9
2,733,003	-		PS417_12560	0.27	-1.4
2,733,003	-		PS417_12560	0.27	-0.6
2,733,003	-		PS417_12560	0.27	-0.7
2,733,119	+		PS417_12560	0.36	+0.4
2,733,399	+		PS417_12560	0.57	-0.8
2,733,435	+		PS417_12560	0.60	+0.1
2,733,436	-		PS417_12560	0.60	-0.1
2,733,436	-		PS417_12560	0.60	+0.2
2,733,470	+		PS417_12560	0.63	-0.2
2,733,478	+		PS417_12560	0.64	+0.2
2,733,479	-		PS417_12560	0.64	-0.3
2,733,572	+		PS417_12560	0.71	+0.1
2,733,572	+		PS417_12560	0.71	+0.3
2,733,641	+		PS417_12560	0.76	-0.6
2,733,734	+		PS417_12560	0.83	-0.4
2,733,885	-				-0.0
2,733,885	-				-0.6
2,733,911	+				-0.9
2,733,911	+				-0.6
2,733,912	-				-0.9
2,733,912	-				-1.7
2,733,988	-				-0.4
2,733,988	-				-0.7
2,734,094	-		PS417_12565	0.11	-1.7
2,734,286	+		PS417_12565	0.31	-0.4
2,734,287	-		PS417_12565	0.31	-1.2
2,734,935	+				+0.1
2,734,935	+				+0.8
2,734,935	+				+0.2
2,734,935	+				+1.0
2,734,936	-				+0.3
2,734,936	-				+0.1
2,735,041	+		PS417_12570	0.14	-0.5
2,735,045	-		PS417_12570	0.15	+0.2
2,735,158	-		PS417_12570	0.29	-0.1
2,735,327	+		PS417_12570	0.51	+0.4
2,735,327	+		PS417_12570	0.51	-0.9
2,735,704	+				+0.7
2,735,704	+				+0.2
2,735,705	-				-0.5
2,735,705	-				-0.3
2,735,805	-				-0.3