Strain Fitness in Pseudomonas simiae WCS417 around PS417_09575

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
2,072,858	+				+0.1
2,072,859	-				-1.6
2,072,859	-				-0.1
2,072,978	+				-0.5
2,072,979	-				+0.4
2,072,979	-				+0.5
2,072,979	-				+0.4
2,073,291	-		PS417_09570	0.25	-0.1
2,073,294	+		PS417_09570	0.25	+0.2
2,073,294	+				+0.7
2,073,381	-		PS417_09570	0.40	-0.7
2,073,434	+		PS417_09570	0.50	-0.2
2,073,501	+		PS417_09570	0.61	+0.1
2,073,502	-		PS417_09570	0.61	-1.7
2,073,723	+				-0.4
2,073,724	-				-0.4
2,073,724	-				-0.6
2,073,741	+				-1.5
2,073,741	+				-0.3
2,073,741	+				-0.6
2,073,742	-				-0.5
2,073,966	+		PS417_09575	0.36	-1.0
2,074,024	-		PS417_09575	0.45	-0.2
2,074,024	-		PS417_09575	0.45	-2.0
2,074,334	-				-0.4
2,074,519	+				+0.6
2,074,603	+		PS417_09580	0.12	-0.0
2,074,751	+		PS417_09580	0.38	-0.4
2,074,751	+		PS417_09580	0.38	+2.0
2,074,817	-		PS417_09580	0.49	-0.7
2,075,363	+		PS417_09585	0.22	+1.1
2,075,363	+		PS417_09585	0.22	+0.4
2,075,364	-		PS417_09585	0.22	-0.4
2,075,364	-		PS417_09585	0.22	+0.2
2,075,364	-		PS417_09585	0.22	-0.5