Strain Fitness in Pseudomonas simiae WCS417 around PS417_08410

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
1,843,283	-				+0.9
1,843,391	+		PS417_08405	0.11	-0.6
1,843,413	-		PS417_08405	0.14	+0.4
1,843,415	+		PS417_08405	0.15	-0.3
1,843,415	+		PS417_08405	0.15	+0.1
1,843,415	+		PS417_08405	0.15	-0.2
1,843,416	-		PS417_08405	0.15	+0.3
1,843,577	+		PS417_08405	0.41	+0.3
1,843,577	+		PS417_08405	0.41	-0.1
1,843,577	+		PS417_08405	0.41	-0.2
1,843,578	-		PS417_08405	0.42	-0.2
1,843,578	-		PS417_08405	0.42	+0.7
1,843,731	+		PS417_08405	0.67	-0.0
1,843,731	+		PS417_08405	0.67	+0.7
1,843,731	+		PS417_08405	0.67	+0.2
1,843,732	-		PS417_08405	0.67	-0.1
1,843,732	-		PS417_08405	0.67	-0.2
1,843,732	-		PS417_08405	0.67	+0.4
1,843,732	-		PS417_08405	0.67	-0.3
1,843,767	+		PS417_08405	0.73	-0.3
1,843,767	+		PS417_08405	0.73	-0.2
1,843,767	+		PS417_08405	0.73	+0.5
1,843,768	-				+0.7
1,843,886	+				-1.0
1,843,886	+				-0.3
1,843,886	+				-0.1
1,843,887	-				-1.2
1,843,887	-				+0.1
1,843,887	-				+0.1
1,843,915	+				+0.2
1,844,016	+				-0.9
1,844,016	+				-1.3
1,844,020	+		PS417_08410	0.10	+0.6
1,844,020	+		PS417_08410	0.10	-0.7
1,844,020	+		PS417_08410	0.10	-2.2
1,844,281	+				+0.2
1,844,282	-				-0.0
1,844,311	+				-0.8
1,844,311	+				-0.5
1,844,311	+				-0.1
1,844,311	+				-0.2
1,844,312	-				-0.9
1,844,312	-				-1.5
1,844,324	+				+1.0
1,844,324	+				-1.3
1,844,325	-				-0.8
1,844,328	+				+0.0
1,844,497	+		PS417_08415	0.15	-0.4
1,844,498	-				-1.2
1,844,498	-		PS417_08415	0.15	-0.1
1,844,530	+		PS417_08415	0.18	-0.8
1,844,530	+		PS417_08415	0.18	-0.7
1,844,531	-		PS417_08415	0.18	-0.8
1,844,531	-		PS417_08415	0.18	+1.6
1,844,531	-		PS417_08415	0.18	-0.4
1,844,531	-		PS417_08415	0.18	-0.6
1,844,683	+		PS417_08415	0.34	-0.1
1,844,684	-		PS417_08415	0.34	-0.7
1,844,686	+				+2.0
1,844,686	+		PS417_08415	0.34	+0.3
1,844,686	+		PS417_08415	0.34	-0.2
1,844,686	+		PS417_08415	0.34	-0.2
1,844,686	+		PS417_08415	0.34	-0.7
1,844,687	-		PS417_08415	0.34	-0.4
1,844,687	-		PS417_08415	0.34	+0.5
1,844,713	+		PS417_08415	0.37	-0.6
1,844,757	+		PS417_08415	0.41	+2.2
1,844,757	+		PS417_08415	0.41	-0.7
1,845,065	-		PS417_08415	0.73	-0.8
1,845,066	+		PS417_08415	0.73	+0.9
1,845,095	-		PS417_08415	0.76	-0.1
1,845,095	-		PS417_08415	0.76	-1.2
1,845,109	-		PS417_08415	0.78	-0.3