Strain Fitness in Pseudomonas simiae WCS417 around PS417_08225

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
1,800,702	-		PS417_08220	0.11	-0.3
1,800,836	-				-1.6
1,800,938	-				-2.1
1,802,276	-		PS417_08225	0.43	-1.3
1,802,477	-		PS417_08225	0.55	-1.8
1,802,517	-		PS417_08225	0.58	+0.0
1,802,521	-		PS417_08225	0.58	-0.1
1,802,910	-		PS417_08225	0.80	-0.7
1,802,933	-		PS417_08225	0.82	-1.2
1,802,933	-		PS417_08225	0.82	-1.1
1,803,188	-				-0.5
1,803,325	-				-0.3
1,803,407	-		PS417_08230	0.12	-1.0
1,803,436	-		PS417_08230	0.14	-1.0
1,803,725	-		PS417_08230	0.36	-0.9