Strain Fitness in Pseudomonas simiae WCS417 around PS417_08190

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
1,792,586	-		PS417_08185	0.19	-2.0
1,792,682	+		PS417_08185	0.28	-1.1
1,792,808	-		PS417_08185	0.40	-2.1
1,792,808	-				-0.8
1,792,822	-		PS417_08185	0.42	-1.2
1,792,822	-		PS417_08185	0.42	-1.1
1,792,848	-		PS417_08185	0.44	-0.3
1,792,921	-				-1.0
1,792,921	-		PS417_08185	0.52	+0.1
1,792,921	-		PS417_08185	0.52	-1.2
1,792,991	-		PS417_08185	0.58	-1.3
1,793,132	-		PS417_08185	0.72	-2.6
1,793,159	-		PS417_08185	0.75	-0.1
1,793,191	-		PS417_08185	0.78	-1.1
1,793,355	-				-1.5
1,793,413	-				-1.1
1,793,413	-				-0.3
1,793,413	-				-0.7
1,793,413	-				-1.7
1,793,483	+				+1.1
1,793,507	+				+0.5
1,793,518	+				-1.7
1,793,518	+				+0.0
1,793,519	-				-1.1
1,793,656	+				-0.1
1,793,724	+		PS417_08190	0.11	-1.2
1,793,742	+		PS417_08190	0.12	-1.1
1,793,743	-		PS417_08190	0.12	-2.1
1,793,817	+		PS417_08190	0.15	-0.6
1,793,817	+		PS417_08190	0.15	-2.1
1,793,817	+		PS417_08190	0.15	+0.5
1,793,823	+		PS417_08190	0.16	-0.5
1,793,823	+		PS417_08190	0.16	-1.6
1,793,823	+		PS417_08190	0.16	-2.1
1,793,861	-		PS417_08190	0.18	-0.5
1,793,868	+		PS417_08190	0.18	-0.8
1,793,869	-		PS417_08190	0.18	-0.9
1,793,869	-		PS417_08190	0.18	-3.5
1,793,869	-		PS417_08190	0.18	-1.2
1,793,878	+				-0.7
1,793,878	+		PS417_08190	0.19	-1.3
1,793,999	+		PS417_08190	0.25	-1.0
1,794,003	+		PS417_08190	0.25	-1.0
1,794,003	+		PS417_08190	0.25	-2.0
1,794,077	+		PS417_08190	0.29	-1.4
1,794,129	+		PS417_08190	0.31	-2.1
1,794,129	+		PS417_08190	0.31	-0.9
1,794,143	+		PS417_08190	0.32	-1.6
1,794,259	+		PS417_08190	0.38	-2.5
1,794,259	+		PS417_08190	0.38	-1.2
1,794,473	+		PS417_08190	0.48	+0.3
1,794,474	-		PS417_08190	0.48	-1.4
1,794,504	+		PS417_08190	0.50	-1.6
1,794,514	-		PS417_08190	0.50	-2.6
1,794,565	+		PS417_08190	0.53	-3.1
1,794,565	+		PS417_08190	0.53	-1.0
1,794,565	+		PS417_08190	0.53	-1.6
1,794,626	+		PS417_08190	0.56	-0.9
1,794,626	+		PS417_08190	0.56	-0.9
1,794,627	-		PS417_08190	0.56	-1.0
1,794,627	-		PS417_08190	0.56	+0.7
1,794,648	+		PS417_08190	0.57	-2.6
1,794,649	-		PS417_08190	0.57	-1.1
1,794,665	+		PS417_08190	0.58	-1.1
1,794,692	+		PS417_08190	0.59	-0.5
1,794,779	+		PS417_08190	0.64	-1.3
1,794,780	-		PS417_08190	0.64	-2.1
1,794,780	-		PS417_08190	0.64	-1.3
1,795,151	-		PS417_08190	0.82	-1.4
1,795,556	-				+1.6
1,795,572	+				+0.3
1,795,572	+				+0.2
1,795,573	-				-0.4
1,795,573	-				-0.2
1,795,573	-				+0.9
1,795,620	-				-0.9
1,795,748	+		PS417_08195	0.14	-0.9
1,795,772	+		PS417_08195	0.16	+0.4
1,795,847	-		PS417_08195	0.22	-1.8
1,795,880	-		PS417_08195	0.25	-0.4
1,795,883	+		PS417_08195	0.25	+0.1
1,795,884	-		PS417_08195	0.25	-1.5
1,795,884	-				-1.2
1,795,884	-		PS417_08195	0.25	-1.5
1,795,902	-		PS417_08195	0.27	-1.1
1,795,902	-		PS417_08195	0.27	-0.3
1,795,965	-		PS417_08195	0.32	+0.2
1,795,972	-		PS417_08195	0.33	-1.2
1,796,098	-		PS417_08195	0.43	-1.6
1,796,098	-		PS417_08195	0.43	-1.2
1,796,159	+		PS417_08195	0.48	-0.4
1,796,314	-		PS417_08195	0.61	+1.0
1,796,394	-		PS417_08195	0.67	-0.2
1,796,394	-		PS417_08195	0.67	+2.0
1,796,404	+		PS417_08195	0.68	-1.2
1,796,438	-		PS417_08195	0.71	-0.6
1,796,458	+		PS417_08195	0.72	-1.3
1,796,459	-		PS417_08195	0.72	-1.0