Strain Fitness in Pseudomonas simiae WCS417 around PS417_08130

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
1,779,643	-		PS417_08125	0.53	-1.6
1,780,163	+				-1.2
1,780,175	+				+0.2
1,780,221	+				+1.1
1,780,222	-				-1.9
1,780,764	+		PS417_08130	0.54	-1.0
1,780,764	+		PS417_08130	0.54	-1.0
1,780,764	+		PS417_08130	0.54	-2.2
1,780,860	+		PS417_08130	0.62	-0.8
1,781,184	+				+0.4
1,781,211	-				+1.0
1,781,211	-				-1.2
1,781,307	+				-0.6
1,781,307	+				-0.1
1,781,307	+				-0.3
1,781,308	-				+0.0
1,781,827	-		PS417_08135	0.23	-1.8
1,781,919	+		PS417_08135	0.28	-2.4
1,782,113	+		PS417_08135	0.36	-2.1
1,782,113	+		PS417_08135	0.36	+0.0
1,782,182	-		PS417_08135	0.40	+0.8