Strain Fitness in Pseudomonas simiae WCS417 around PS417_07920

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
1,734,559	-		PS417_07915	0.18	+0.1
1,734,641	+		PS417_07915	0.25	-0.0
1,734,641	+		PS417_07915	0.25	+1.0
1,734,642	-		PS417_07915	0.25	-0.1
1,734,643	+				-0.6
1,734,644	-		PS417_07915	0.25	+0.2
1,734,644	-		PS417_07915	0.25	+0.8
1,734,644	-		PS417_07915	0.25	+0.2
1,734,691	+		PS417_07915	0.29	-1.2
1,734,692	-		PS417_07915	0.29	+0.5
1,734,776	-		PS417_07915	0.36	-0.6
1,734,776	-		PS417_07915	0.36	+0.4
1,734,776	-		PS417_07915	0.36	+0.1
1,734,776	-		PS417_07915	0.36	+0.0
1,734,781	+		PS417_07915	0.36	+0.3
1,734,782	-		PS417_07915	0.36	+0.0
1,734,785	+		PS417_07915	0.37	+0.1
1,734,785	+		PS417_07915	0.37	-0.4
1,734,785	+		PS417_07915	0.37	-0.2
1,734,785	+		PS417_07915	0.37	+0.3
1,734,786	-		PS417_07915	0.37	+0.6
1,734,786	-		PS417_07915	0.37	+1.1
1,734,786	-		PS417_07915	0.37	+0.2
1,734,829	+		PS417_07915	0.40	-0.1
1,734,829	+		PS417_07915	0.40	-0.4
1,734,830	-		PS417_07915	0.40	+1.3
1,734,830	-		PS417_07915	0.40	+0.3
1,734,830	-		PS417_07915	0.40	-0.4
1,734,830	-		PS417_07915	0.40	-1.4
1,734,923	+		PS417_07915	0.48	-0.4
1,734,924	-		PS417_07915	0.48	+0.3
1,735,019	+		PS417_07915	0.56	-0.1
1,735,020	-		PS417_07915	0.56	-0.7
1,735,034	+		PS417_07915	0.58	-0.2
1,735,035	-		PS417_07915	0.58	-0.6
1,735,110	+		PS417_07915	0.64	-0.8
1,735,209	+		PS417_07915	0.72	-1.2
1,735,213	+		PS417_07915	0.73	-1.3
1,735,213	+		PS417_07915	0.73	+0.3
1,735,213	+		PS417_07915	0.73	-2.4
1,735,213	+		PS417_07915	0.73	+1.4
1,735,213	+				+2.0
1,735,214	-		PS417_07915	0.73	-1.6
1,735,214	-		PS417_07915	0.73	+0.3
1,735,214	-				+1.4
1,735,214	-				-0.2
1,735,267	-		PS417_07915	0.77	+0.0
1,735,267	-		PS417_07915	0.77	+0.8
1,735,267	-		PS417_07915	0.77	-0.2
1,735,267	-		PS417_07915	0.77	+1.1
1,735,322	+		PS417_07915	0.82	-0.0
1,735,448	+				+1.2
1,735,482	-				+0.0
1,735,483	+				+0.7
1,735,542	-				-2.6
1,735,542	-				+0.2
1,735,576	-		PS417_07920	0.11	+1.9
1,735,591	+				-1.0
1,735,591	+		PS417_07920	0.15	-0.2
1,735,598	-		PS417_07920	0.18	-0.4
1,735,623	+		PS417_07920	0.25	+0.1
1,735,642	+		PS417_07920	0.31	+0.3
1,735,643	-		PS417_07920	0.31	+0.2
1,735,709	-		PS417_07920	0.51	-0.2
1,735,768	+		PS417_07920	0.69	-0.0
1,735,770	+		PS417_07920	0.70	+0.4
1,735,915	+				+0.3
1,735,916	-				+0.2
1,736,067	-				-0.2
1,736,112	+				-0.1
1,736,113	-				-0.0
1,736,225	-				+1.0
1,736,225	-				+1.3
1,736,225	-				+0.3
1,736,257	+				+1.6
1,736,312	+				+0.3
1,736,313	-				+0.6
1,736,313	-				-1.2
1,736,313	-				+0.4
1,736,313	-				+0.1
1,736,313	-				+0.5
1,736,314	+				+1.2
1,736,315	-				+0.4
1,736,315	-				-0.6
1,736,363	+				+0.8
1,736,364	-				+1.0
1,736,548	+				-0.9
1,736,548	+				-0.6
1,736,548	+				-0.0
1,736,548	+				-0.8
1,736,549	-				+2.1
1,736,612	-				+0.3
1,736,615	+				+1.4
1,736,616	-				+0.3
1,736,616	-				+0.3
1,736,624	-				+0.0
1,736,688	+				+0.4
1,736,688	+				-0.0
1,736,688	+				+1.0
1,736,688	+				+1.2
1,736,688	+				+0.2
1,736,688	+				+0.3
1,736,688	+				-0.0
1,736,689	-				-0.5
1,736,689	-				+0.0
1,736,689	-				+0.3
1,736,689	-				+1.3
1,736,689	-				+0.4
1,736,689	-				-0.6
1,736,710	-				+0.1
1,736,731	-				-0.4
1,736,731	-				+0.5
1,736,731	-				+0.6
1,736,767	+				+0.0
1,736,768	-				-0.0
1,736,809	+				+0.9
1,736,810	-				-0.3
1,736,810	-				-0.5