Strain Fitness in Pseudomonas simiae WCS417 around PS417_07400

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
1,630,678	+				+2.0
1,630,678	+				-0.3
1,630,678	+				+0.8
1,630,679	-				+0.3
1,630,679	-				+0.1
1,630,711	+				+3.6
1,630,711	+				+0.2
1,630,712	-				-0.3
1,630,712	-				+0.1
1,630,795	+				-0.5
1,630,795	+				+0.0
1,630,818	-				-0.2
1,631,348	-				-1.7
1,631,562	-				-1.7
1,631,800	+		PS417_07400	0.30	-1.0
1,631,800	+		PS417_07400	0.30	-0.1
1,631,800	+		PS417_07400	0.30	-0.5
1,631,803	+		PS417_07400	0.31	-1.4
1,632,091	+				+0.5
1,632,091	+				+0.1
1,632,092	-				+0.6
1,632,126	+				-0.0
1,632,126	+				+0.1
1,632,126	+				+0.3
1,632,127	-				+2.0
1,632,156	+				-0.9
1,632,156	+				+0.0
1,632,156	+				+1.0
1,632,156	+				+0.0
1,632,157	-				-0.2
1,632,157	-				+2.0
1,632,157	-				-1.1
1,632,157	-				-0.9
1,632,157	-				-0.2
1,632,157	-				+1.2
1,632,157	-				+0.9
1,632,157	-				+0.4
1,632,157	-				-0.0
1,632,157	-				+0.3
1,632,214	+				-0.0
1,632,215	-				-0.2
1,632,448	+		PS417_07405	0.26	-0.6
1,632,448	+		PS417_07405	0.26	-0.4
1,632,449	-		PS417_07405	0.26	+0.9
1,632,449	-		PS417_07405	0.26	-0.2
1,632,449	-		PS417_07405	0.26	-1.1
1,632,944	+		PS417_07405	0.67	-0.6
1,632,956	+		PS417_07405	0.68	-0.8
1,633,021	+		PS417_07405	0.73	+0.9
1,633,022	-		PS417_07405	0.73	-0.5
1,633,082	+		PS417_07405	0.78	-0.0