Strain Fitness in Pseudomonas simiae WCS417 around PS417_07120

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
1,574,320	+		PS417_07115	0.86	-0.1
1,574,626	-				-0.4
1,574,628	+				-0.9
1,574,628	+				-0.3
1,574,628	+				+2.0
1,574,628	+				-1.6
1,574,628	+				+0.9
1,574,628	+				+0.7
1,574,629	-				+1.0
1,574,629	-				+0.3
1,574,629	-				+0.5
1,574,631	+				+0.1
1,574,632	-				-0.7
1,574,632	-				-1.2
1,574,633	+				+1.8
1,574,633	+				+0.1
1,574,633	+				+0.8
1,574,633	+				-0.0
1,574,633	+				+0.2
1,574,634	-				-0.6
1,574,634	-				-0.4
1,574,634	-				-0.7
1,574,635	+				+0.5
1,574,635	+				+2.6
1,574,635	+				-2.0
1,574,635	+				+0.6
1,574,684	+				-0.0
1,574,684	+				-1.0
1,574,755	-				-2.0
1,574,863	+				+1.1
1,574,945	+				-0.8
1,574,991	-				-1.0
1,575,181	+		PS417_07120	0.30	-0.9
1,575,230	+		PS417_07120	0.38	-1.1
1,575,263	-		PS417_07120	0.44	-2.0
1,575,263	-		PS417_07120	0.44	-0.2
1,575,302	+		PS417_07120	0.51	-0.9
1,575,303	-		PS417_07120	0.51	-1.3
1,575,303	-		PS417_07120	0.51	-1.3
1,575,475	+		PS417_07120	0.80	-1.0
1,575,475	+		PS417_07120	0.80	-1.6
1,576,224	-				+0.3
1,576,349	+		PS417_07130	0.13	-2.0
1,576,350	-		PS417_07130	0.13	+0.3
1,576,360	-		PS417_07130	0.14	+0.2
1,576,575	+		PS417_07130	0.36	+0.8