Strain Fitness in Pseudomonas simiae WCS417 around PS417_06895

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
1,525,276	+				-0.9
1,525,277	-				+0.1
1,525,383	-				-0.6
1,525,385	+				+0.3
1,525,385	+				-1.1
1,525,386	-				+0.2
1,525,386	-				-0.3
1,525,386	-				+0.2
1,525,386	-				+0.0
1,525,682	+		PS417_06890	0.44	-0.5
1,525,683	-		PS417_06890	0.44	+0.9
1,525,701	+		PS417_06890	0.46	+0.5
1,525,925	+		PS417_06890	0.75	+0.6
1,525,926	-		PS417_06890	0.75	-0.5
1,525,928	+		PS417_06890	0.75	+2.3
1,525,929	-		PS417_06890	0.75	-0.3
1,525,929	-		PS417_06890	0.75	-1.3
1,526,040	+		PS417_06890	0.90	-0.9
1,526,040	+		PS417_06890	0.90	-0.0
1,526,041	-		PS417_06890	0.90	-0.3
1,526,041	-				+0.4
1,526,108	-				-0.3
1,526,268	+				-0.2
1,526,311	+		PS417_06895	0.16	-0.4
1,526,311	+		PS417_06895	0.16	-0.1
1,526,312	-		PS417_06895	0.16	-2.7
1,526,312	-		PS417_06895	0.16	-0.1
1,526,435	-		PS417_06895	0.39	+0.0
1,526,533	+		PS417_06895	0.58	-0.6
1,526,534	-		PS417_06895	0.58	-1.1
1,527,095	-		PS417_06900	0.20	-1.5
1,527,159	+		PS417_06900	0.26	-0.6
1,527,174	+		PS417_06900	0.28	+0.1
1,527,376	+		PS417_06900	0.47	-0.5
1,527,462	+		PS417_06900	0.56	-0.0
1,527,478	-		PS417_06900	0.57	+0.4
1,527,478	-		PS417_06900	0.57	-0.0
1,527,501	+		PS417_06900	0.60	-0.2
1,527,502	-		PS417_06900	0.60	-0.2
1,527,581	-		PS417_06900	0.68	-0.2
1,527,581	-		PS417_06900	0.68	-0.1