Strain Fitness in Pseudomonas simiae WCS417 around PS417_06780

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
1,501,942	-		PS417_06775	0.38	-0.5
1,502,257	-		PS417_06775	0.66	-0.8
1,502,257	-		PS417_06775	0.66	-0.8
1,502,299	-		PS417_06775	0.69	-1.1
1,502,362	-		PS417_06775	0.75	-2.7
1,502,383	-		PS417_06775	0.77	-0.5
1,502,644	+				-0.6
1,502,727	-				-0.8
1,502,730	+				+1.0
1,502,731	-				-0.2
1,502,907	-				+0.4
1,502,933	+				-0.0
1,503,012	+		PS417_06780	0.11	+0.4
1,503,085	-		PS417_06780	0.23	-0.7
1,503,284	+		PS417_06780	0.54	-1.7
1,503,447	+		PS417_06780	0.80	-0.1
1,503,447	+		PS417_06780	0.80	-1.3
1,503,448	-		PS417_06780	0.80	-0.8
1,503,448	-		PS417_06780	0.80	-0.0
1,503,660	+				-0.5
1,503,660	+				-0.3
1,503,660	+				-0.9
1,503,661	-				+0.3
1,503,661	-				-0.3
1,503,661	-				-1.1
1,503,662	+				-1.7
1,503,662	+				-0.4
1,503,663	-				-0.5
1,503,663	-				+0.0
1,503,664	+				-1.8
1,503,686	-				-0.4
1,503,698	-				-1.0
1,503,701	+				+0.4
1,503,738	+				+0.4
1,503,738	+				+0.8
1,503,770	+				-0.6
1,503,770	+				+0.1
1,503,771	-				-0.1
1,503,771	-				-0.6
1,503,771	-				+0.2
1,503,771	-				-0.0
1,503,776	+				-0.3
1,503,856	+				-0.3
1,504,040	-		PS417_06785	0.20	+0.8
1,504,147	+		PS417_06785	0.30	+0.2
1,504,147	+		PS417_06785	0.30	-2.2
1,504,148	-		PS417_06785	0.30	-0.3
1,504,351	+		PS417_06785	0.50	-0.1
1,504,556	-		PS417_06785	0.69	-0.6