Strain Fitness in Pseudomonas simiae WCS417 around PS417_06530

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
1,446,536	+		PS417_06525	0.54	-0.2
1,446,536	+		PS417_06525	0.54	-1.0
1,446,536	+		PS417_06525	0.54	+0.8
1,446,537	-		PS417_06525	0.54	+0.3
1,446,537	-		PS417_06525	0.54	-0.4
1,446,537	-		PS417_06525	0.54	-1.2
1,446,539	-		PS417_06525	0.54	+0.2
1,446,584	-		PS417_06525	0.58	-1.0
1,446,593	-		PS417_06525	0.59	-0.3
1,446,593	-		PS417_06525	0.59	-0.3
1,446,663	-		PS417_06525	0.65	-3.0
1,446,665	+		PS417_06525	0.65	-0.5
1,446,666	-		PS417_06525	0.65	-1.0
1,446,738	+		PS417_06525	0.72	-0.1
1,446,738	+		PS417_06525	0.72	-0.2
1,446,758	+				-0.5
1,446,758	+		PS417_06525	0.73	+0.0
1,446,758	+		PS417_06525	0.73	+0.7
1,446,968	-				-1.0
1,446,968	-				-0.5
1,446,990	-				-0.3
1,447,002	+				+0.6
1,447,002	+				-0.5
1,447,006	+				+0.5
1,447,006	+				-0.4
1,447,006	+				+0.7
1,447,007	-				-0.9
1,447,011	-				-0.4
1,447,011	-				-0.8
1,447,102	-				-1.5
1,447,103	+				+0.8
1,447,103	+				-1.3
1,447,199	+				+0.0
1,447,236	+				-1.5
1,447,246	+				-1.3
1,447,392	+		PS417_06530	0.16	-4.3
1,447,685	+		PS417_06530	0.42	-0.0
1,447,781	+		PS417_06530	0.50	-0.7
1,447,781	+		PS417_06530	0.50	-1.3
1,448,123	+		PS417_06530	0.80	+0.6
1,448,366	+				-0.8
1,449,096	+				+0.9
1,449,096	+				-0.3
1,449,132	-				-0.4
1,449,143	-				+0.2
1,449,143	-				-0.3
1,449,155	+				-0.3
1,449,155	+				+0.6
1,449,156	-				-0.3
1,449,156	-				-0.4
1,449,197	-				+1.3
1,449,197	-				+0.3
1,449,199	+				-0.8
1,449,199	+				+0.6
1,449,261	+				-0.3
1,449,291	+				-0.8
1,449,292	-				-1.9
1,449,292	-				+0.2
1,449,298	-				-1.1
1,449,298	-				-0.2
1,449,298	-				+0.8
1,449,298	-				+0.1
1,449,309	-				-0.0
1,449,309	-				-0.6