Strain Fitness in Pseudomonas simiae WCS417 around PS417_05850

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
1,299,405	+		PS417_05840	0.52	+1.4
1,299,406	-		PS417_05840	0.53	-0.1
1,299,713	-				-1.0
1,299,783	+				-1.4
1,299,784	-				-0.9
1,299,789	+				+1.1
1,299,789	+				-0.6
1,299,790	-				+0.9
1,299,790	-				+0.9
1,299,826	-				-0.5
1,300,150	+				-0.1
1,300,150	+				+0.2
1,300,277	+		PS417_05850	0.13	-1.0
1,300,277	+		PS417_05850	0.13	-0.4
1,300,646	-		PS417_05850	0.53	-0.7
1,300,646	-		PS417_05850	0.53	-1.1
1,301,167	+				-1.2
1,301,983	+				-1.8
1,302,058	+				-0.0
1,302,058	+				+0.2
1,302,058	+				+0.2
1,302,059	-				+0.5
1,302,059	-				-2.2
1,302,059	-				+0.9
1,302,062	+				-0.6
1,302,063	-				-0.7