Strain Fitness in Pseudomonas simiae WCS417 around PS417_05820

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
1,294,788	+		PS417_05815	0.18	-0.7
1,294,903	-		PS417_05815	0.29	+0.1
1,295,078	+		PS417_05815	0.45	-0.3
1,295,078	+		PS417_05815	0.45	+0.3
1,295,078	+		PS417_05815	0.45	+1.4
1,295,079	-		PS417_05815	0.45	+0.3
1,295,248	-				+0.3
1,295,400	+		PS417_05815	0.76	+1.5
1,295,400	+		PS417_05815	0.76	+0.9
1,295,473	-		PS417_05815	0.83	-0.0
1,295,676	+				-2.2
1,295,676	+				-0.1
1,295,676	+				-0.6
1,296,024	+		PS417_05820	0.76	-1.4
1,296,024	+		PS417_05820	0.76	-1.7
1,296,071	+		PS417_05820	0.87	-0.8
1,296,159	+				+0.6
1,296,270	+				-1.0
1,296,270	+				-0.8
1,296,373	-		PS417_05825	0.16	-0.1
1,296,552	+		PS417_05825	0.32	+1.2
1,296,552	+		PS417_05825	0.32	+0.8
1,297,005	+		PS417_05825	0.73	-0.3
1,297,006	-		PS417_05825	0.73	-0.7
1,297,006	-		PS417_05825	0.73	-1.6
1,297,006	-		PS417_05825	0.73	+1.8