Strain Fitness in Pseudomonas simiae WCS417 around PS417_04905

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
1,092,149	-		PS417_04900	0.36	+1.6
1,092,149	-		PS417_04900	0.36	-0.3
1,092,151	+		PS417_04900	0.37	+0.4
1,092,151	+		PS417_04900	0.37	-0.8
1,092,241	-		PS417_04900	0.45	-0.7
1,092,292	+		PS417_04900	0.50	+0.3
1,092,293	-		PS417_04900	0.50	-0.1
1,092,293	-		PS417_04900	0.50	+0.8
1,092,293	-		PS417_04900	0.50	+0.5
1,092,421	+		PS417_04900	0.63	+0.8
1,092,422	-		PS417_04900	0.63	-0.5
1,092,518	-		PS417_04900	0.72	-1.3
1,092,666	-		PS417_04900	0.87	-0.5
1,092,666	-		PS417_04900	0.87	-0.0
1,092,691	+		PS417_04900	0.89	-0.6
1,092,692	-		PS417_04900	0.89	+0.2
1,092,692	-		PS417_04900	0.89	+1.0
1,092,784	+				+0.3
1,092,785	-				-1.0
1,093,033	-		PS417_04905	0.13	+0.8
1,093,115	-		PS417_04905	0.20	-1.2
1,093,209	-		PS417_04905	0.28	+0.6
1,093,255	+		PS417_04905	0.32	-1.8
1,093,255	+		PS417_04905	0.32	+0.6
1,093,256	-		PS417_04905	0.32	+1.7
1,093,256	-				-1.9
1,093,687	+		PS417_04905	0.69	+0.2
1,094,027	-				+0.9
1,094,027	-				-0.1
1,094,080	+				+0.0
1,094,081	-				-0.7
1,094,201	+		PS417_04910	0.12	+1.0
1,094,330	+		PS417_04910	0.24	-1.1
1,094,330	+		PS417_04910	0.24	+2.1
1,094,331	-		PS417_04910	0.24	+0.3
1,094,331	-		PS417_04910	0.24	-0.6
1,094,411	-		PS417_04910	0.31	-1.5
1,094,798	+		PS417_04910	0.66	+0.6
1,094,798	+		PS417_04910	0.66	-0.3
1,094,799	-		PS417_04910	0.66	-0.1