Strain Fitness in Pseudomonas simiae WCS417 around PS417_22875

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
4,957,125	+		PS417_22870	0.35	-0.3
4,957,282	-		PS417_22870	0.54	-0.7
4,957,448	+		PS417_22870	0.73	-1.0
4,957,594	+		PS417_22870	0.90	+0.7
4,957,605	+				+0.7
4,957,642	-				+0.2
4,957,642	-				-0.1
4,957,665	+				+0.6
4,957,756	+				-1.2
4,957,757	-				+0.5
4,957,825	+				-0.2
4,957,825	+				+0.3
4,957,825	+				+1.1
4,957,826	-				-0.5
4,957,843	-				-1.5
4,957,966	-		PS417_22875	0.40	+0.9
4,958,094	+		PS417_22875	0.85	+0.3
4,958,120	+				+0.7
4,958,120	+				-0.7
4,958,120	+				+0.1
4,958,121	-				-0.3
4,958,129	-				+0.3
4,958,155	-				-3.7
4,958,155	-				-0.1
4,958,191	-				-2.2
4,958,195	+				-1.1
4,958,196	-				-0.5
4,958,196	-				+0.0
4,958,196	-				+0.6
4,958,215	-				+0.8
4,958,239	-				+0.3
4,958,308	+				-0.4
4,958,381	+				-0.7
4,958,381	+				-1.4