Strain Fitness in Pseudomonas simiae WCS417 around PS417_20980

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
4,563,736	-		PS417_20975	0.48	+1.1
4,563,765	-		PS417_20975	0.49	-0.4
4,563,852	+		PS417_20975	0.55	-0.5
4,563,935	+		PS417_20975	0.60	+0.8
4,563,935	+		PS417_20975	0.60	+0.1
4,563,935	+		PS417_20975	0.60	+0.2
4,563,935	+		PS417_20975	0.60	-0.3
4,563,936	-		PS417_20975	0.60	-0.6
4,563,938	+		PS417_20975	0.60	-1.0
4,563,938	+		PS417_20975	0.60	-0.4
4,563,938	+		PS417_20975	0.60	-0.5
4,563,938	+				+1.4
4,564,151	+		PS417_20975	0.73	+0.2
4,564,202	-		PS417_20975	0.76	-0.7
4,564,208	-				+0.7
4,564,208	-		PS417_20975	0.76	-1.6
4,564,257	+		PS417_20975	0.79	-0.1
4,564,257	+		PS417_20975	0.79	-0.4
4,564,258	-		PS417_20975	0.79	-0.1
4,564,258	-		PS417_20975	0.79	-1.1
4,564,258	-		PS417_20975	0.79	+0.4
4,564,258	-		PS417_20975	0.79	-0.7
4,564,258	-		PS417_20975	0.79	-1.2
4,564,258	-		PS417_20975	0.79	+0.2
4,564,258	-		PS417_20975	0.79	-0.4
4,564,258	-		PS417_20975	0.79	-0.1
4,564,258	-		PS417_20975	0.79	+0.2
4,564,259	+		PS417_20975	0.79	-0.7
4,564,259	+		PS417_20975	0.79	-0.6
4,564,260	-		PS417_20975	0.79	+0.2
4,564,260	-		PS417_20975	0.79	-0.8
4,564,260	-		PS417_20975	0.79	-0.1
4,564,280	+		PS417_20975	0.80	+0.1
4,564,280	+		PS417_20975	0.80	-0.0
4,564,281	-		PS417_20975	0.80	+1.3
4,564,281	-		PS417_20975	0.80	+0.0
4,564,281	-		PS417_20975	0.80	-0.4
4,564,281	-		PS417_20975	0.80	-0.6
4,564,281	-		PS417_20975	0.80	-1.4
4,564,283	+		PS417_20975	0.80	+0.0
4,564,283	+		PS417_20975	0.80	+0.8
4,564,284	-		PS417_20975	0.80	-1.5
4,564,589	+				-0.3
4,564,635	+				+0.5
4,564,636	-				-0.5
4,564,859	-		PS417_20980	0.30	-0.8
4,564,860	+		PS417_20980	0.30	-1.3
4,564,860	+		PS417_20980	0.30	-0.6
4,565,134	+		PS417_20980	0.67	-2.1
4,565,134	+		PS417_20980	0.67	-0.5
4,565,134	+		PS417_20980	0.67	-0.7
4,565,135	-		PS417_20980	0.67	-2.2
4,565,135	-		PS417_20980	0.67	-1.1
4,565,199	+		PS417_20980	0.76	+0.3
4,565,268	+		PS417_20980	0.85	-1.2
4,565,535	-				+0.1
4,565,627	+		PS417_20985	0.19	-0.8
4,565,677	-		PS417_20985	0.24	-0.3
4,565,979	-		PS417_20985	0.55	+0.5
4,566,012	+		PS417_20985	0.58	-1.6