Strain Fitness in Pseudomonas simiae WCS417 around PS417_20970

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
4,560,776	-		PS417_20960	0.83	-0.2
4,560,920	-				-0.0
4,561,176	+		PS417_20965	0.31	+0.6
4,561,176	+		PS417_20965	0.31	-0.1
4,561,177	-		PS417_20965	0.32	+0.6
4,561,177	-		PS417_20965	0.32	-0.2
4,561,177	-		PS417_20965	0.32	+0.8
4,561,177	-		PS417_20965	0.32	+0.0
4,561,177	-		PS417_20965	0.32	+0.2
4,561,289	+		PS417_20965	0.51	+0.7
4,561,289	+		PS417_20965	0.51	-0.0
4,561,290	-		PS417_20965	0.51	+0.2
4,561,290	-		PS417_20965	0.51	-0.7
4,561,290	-		PS417_20965	0.51	-0.6
4,561,478	+		PS417_20965	0.84	+0.2
4,561,479	-		PS417_20965	0.84	-0.8
4,561,700	-				-0.1
4,561,700	-				-1.1
4,561,700	-				-0.4
4,561,700	-				+0.1
4,561,889	+		PS417_20970	0.13	-0.7
4,561,890	-		PS417_20970	0.13	-1.1
4,562,031	+		PS417_20970	0.25	-1.0
4,562,032	-		PS417_20970	0.25	-0.3
4,562,116	-		PS417_20970	0.32	-0.1
4,562,388	-		PS417_20970	0.54	-1.6
4,562,430	+		PS417_20970	0.58	-0.4
4,562,475	+		PS417_20970	0.62	-0.8
4,562,476	-		PS417_20970	0.62	-0.2
4,562,476	-		PS417_20970	0.62	-0.4
4,562,556	-		PS417_20970	0.68	-0.3
4,562,571	+		PS417_20970	0.70	-2.0
4,562,571	+		PS417_20970	0.70	-1.2
4,562,572	-		PS417_20970	0.70	-0.6
4,562,572	-				-2.6
4,562,572	-		PS417_20970	0.70	-0.9
4,562,817	+		PS417_20970	0.90	+0.1
4,562,818	-				-0.7
4,563,050	+				-1.8
4,563,051	-				+0.8
4,563,051	-				+0.1
4,563,054	+				-0.5
4,563,054	+				-1.1
4,563,055	-				+0.2
4,563,055	-				-0.2
4,563,055	-				-0.2
4,563,055	-				+2.7
4,563,055	-				-0.7
4,563,137	+		PS417_20975	0.12	-0.3
4,563,140	+		PS417_20975	0.12	-0.7
4,563,140	+		PS417_20975	0.12	+0.2
4,563,141	-		PS417_20975	0.12	-0.6
4,563,189	+		PS417_20975	0.15	-1.6
4,563,189	+		PS417_20975	0.15	+0.5
4,563,190	-		PS417_20975	0.15	+0.6
4,563,281	-		PS417_20975	0.20	-0.5
4,563,311	+		PS417_20975	0.22	-0.4
4,563,334	-		PS417_20975	0.24	-0.5
4,563,334	-		PS417_20975	0.24	-0.1
4,563,509	-		PS417_20975	0.34	-1.2
4,563,736	-		PS417_20975	0.48	+1.1
4,563,765	-		PS417_20975	0.49	-0.4
4,563,852	+		PS417_20975	0.55	-0.5
4,563,935	+		PS417_20975	0.60	+0.8
4,563,935	+		PS417_20975	0.60	+0.1
4,563,935	+		PS417_20975	0.60	+0.2
4,563,935	+		PS417_20975	0.60	-0.3
4,563,936	-		PS417_20975	0.60	-0.6
4,563,938	+		PS417_20975	0.60	-1.0
4,563,938	+		PS417_20975	0.60	-0.4
4,563,938	+		PS417_20975	0.60	-0.5
4,563,938	+				+1.4