Strain Fitness in Pseudomonas simiae WCS417 around PS417_19870

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
4,314,564	-				-0.1
4,314,579	+		PS417_19865	0.60	+1.6
4,314,579	+		PS417_19865	0.60	+0.5
4,314,631	+		PS417_19865	0.63	+0.8
4,314,727	-		PS417_19865	0.68	+1.5
4,314,727	-		PS417_19865	0.68	+1.4
4,314,777	+		PS417_19865	0.70	+1.2
4,314,778	-		PS417_19865	0.70	+0.5
4,314,789	-		PS417_19865	0.71	+0.7
4,314,789	-		PS417_19865	0.71	+0.7
4,315,129	+		PS417_19865	0.87	+0.9
4,315,129	+		PS417_19865	0.87	+1.0
4,315,130	-		PS417_19865	0.87	+0.5
4,315,192	+				+0.5
4,315,357	-				+1.0
4,315,401	-				-0.6
4,315,401	-				-0.8
4,315,402	+				+1.3
4,315,402	+				+0.9
4,315,402	+				+0.4
4,315,402	+				+2.3
4,315,402	+				+1.1
4,315,402	+				+1.8
4,315,403	-				-0.1
4,315,403	-				-0.3
4,315,403	-				-0.2
4,315,431	-				+0.4
4,315,625	+		PS417_19870	0.18	+1.5
4,315,626	-		PS417_19870	0.18	-0.5
4,316,230	+		PS417_19870	0.65	+0.9
4,316,420	+		PS417_19870	0.80	+1.3
4,316,420	+				-0.1
4,316,432	+		PS417_19870	0.81	+1.0
4,316,616	-				-0.2
4,316,616	-				+0.4
4,317,278	-		PS417_19875	0.54	+2.0