Strain Fitness in Pseudomonas simiae WCS417 around PS417_19480

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
4,222,172	-				-0.4
4,222,212	+				-0.5
4,222,661	+		PS417_19475	0.75	+0.8
4,222,661	+		PS417_19475	0.75	+1.6
4,222,661	+		PS417_19475	0.75	-0.6
4,222,661	+		PS417_19475	0.75	-0.1
4,222,661	+		PS417_19475	0.75	-0.0
4,222,662	-		PS417_19475	0.75	+0.9
4,222,662	-		PS417_19475	0.75	+1.0
4,222,662	-		PS417_19475	0.75	-0.0
4,222,701	+		PS417_19475	0.81	-0.5
4,222,701	+		PS417_19475	0.81	-1.6
4,222,701	+		PS417_19475	0.81	-1.4
4,222,702	-		PS417_19475	0.81	-1.7
4,222,702	-		PS417_19475	0.81	-0.1
4,222,835	+				-0.2
4,222,882	+				+0.1
4,222,987	+				-0.1
4,222,988	-				-0.3
4,222,988	-				+0.2
4,222,988	-				-1.2
4,222,991	+				-0.2
4,222,991	+				+0.0
4,223,146	-		PS417_19480	0.12	-0.4
4,223,148	+		PS417_19480	0.12	-0.5
4,223,148	+		PS417_19480	0.12	-0.7
4,223,149	-		PS417_19480	0.12	-1.3
4,223,149	-		PS417_19480	0.12	-0.5
4,223,316	+		PS417_19480	0.25	-0.1
4,223,619	-		PS417_19480	0.49	-1.5
4,223,620	-		PS417_19480	0.49	-1.0
4,223,635	-		PS417_19480	0.50	-2.0
4,223,875	+		PS417_19480	0.68	-0.2
4,223,875	+		PS417_19480	0.68	-1.2
4,223,880	-				+0.5
4,223,880	-		PS417_19480	0.69	+0.3
4,223,927	-		PS417_19480	0.72	-1.0
4,224,258	+				-1.8
4,224,259	-				-0.6
4,224,375	-				-0.2
4,224,613	+				-0.0
4,224,614	-				-0.3
4,224,655	+				+1.5