Strain Fitness in Pseudomonas simiae WCS417 around PS417_18150

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
3,952,360	+		PS417_18145	0.24	+0.1
3,952,908	+		PS417_18145	0.66	+0.2
3,953,088	-		PS417_18145	0.80	-0.4
3,953,433	+		PS417_18150	0.14	+0.6
3,953,434	-		PS417_18150	0.14	+0.2
3,953,434	-				-1.1
3,953,491	+		PS417_18150	0.22	+0.6
3,953,491	+		PS417_18150	0.22	+0.5
3,953,491	+				-0.6
3,953,492	-		PS417_18150	0.23	+0.6
3,953,729	+		PS417_18150	0.57	+1.9
3,953,730	-		PS417_18150	0.57	+1.2
3,953,823	+		PS417_18150	0.71	+0.2
3,953,875	+		PS417_18150	0.79	+0.2
3,954,005	-				-1.3
3,954,131	+				+1.1
3,954,131	+				+1.4
3,954,131	+				-1.6
3,954,131	+				-0.3
3,954,132	-				-1.5
3,954,419	+				+0.9
3,954,497	-		PS417_18155	0.12	-0.2
3,954,579	+		PS417_18155	0.16	-1.9
3,954,629	+		PS417_18155	0.18	+0.7
3,954,848	+		PS417_18155	0.27	-1.0
3,954,849	-		PS417_18155	0.27	-0.6
3,954,849	-		PS417_18155	0.27	-2.9
3,954,911	+		PS417_18155	0.30	-0.1
3,954,971	+		PS417_18155	0.32	-0.3
3,954,972	-		PS417_18155	0.32	+0.6
3,955,004	+		PS417_18155	0.34	+0.8