Strain Fitness in Pseudomonas simiae WCS417 around PS417_16945

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
3,696,879	-		PS417_16940	0.69	-0.3
3,696,954	+		PS417_16940	0.72	-0.2
3,697,351	+		PS417_16940	0.84	-0.6
3,697,352	-		PS417_16940	0.84	-0.6
3,697,462	+		PS417_16940	0.88	-1.0
3,697,463	-		PS417_16940	0.88	+0.1
3,697,888	+				-1.4
3,697,888	+				-0.6
3,698,045	+		PS417_16945	0.27	+1.4
3,698,116	+		PS417_16945	0.38	-1.4
3,698,116	+		PS417_16945	0.38	+0.3
3,698,267	+		PS417_16945	0.61	+0.2
3,698,363	+		PS417_16945	0.76	-0.8
3,698,488	-				-0.4
3,698,514	+				+0.0
3,698,794	+		PS417_16950	0.33	-1.0
3,698,809	+		PS417_16950	0.35	+0.4
3,698,810	-		PS417_16950	0.35	-0.8
3,698,810	-		PS417_16950	0.35	+0.3
3,699,087	-		PS417_16950	0.82	-1.1
3,699,190	-				+0.2
3,699,225	+				+0.0
3,699,225	+				+0.3
3,699,226	-				-0.4
3,699,238	+				+1.6
3,699,251	+				+0.3
3,699,251	+				+0.1
3,699,252	-				+0.4
3,699,409	+		PS417_16955	0.21	+0.5
3,699,409	+		PS417_16955	0.21	+0.0
3,699,409	+		PS417_16955	0.21	+0.2
3,699,410	-		PS417_16955	0.21	-0.5