Strain Fitness in Pseudomonas simiae WCS417 around PS417_14760

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
3,225,545	+		PS417_14755	0.24	-1.0
3,225,617	+				-1.5
3,225,930	-		PS417_14755	0.61	-1.7
3,226,121	+		PS417_14755	0.80	+0.8
3,226,122	-		PS417_14755	0.80	+0.5
3,226,122	-				-1.1
3,226,401	+				-0.5
3,226,453	+				-1.4
3,226,481	-				-0.1
3,226,481	-				-0.1
3,226,481	-				-0.7
3,226,608	-		PS417_14760	0.26	-0.8
3,226,608	-		PS417_14760	0.26	-1.4
3,226,608	-		PS417_14760	0.26	-0.2
3,226,748	+		PS417_14760	0.59	+0.1
3,226,749	-		PS417_14760	0.60	-2.2
3,227,105	-		PS417_14765	0.15	-0.3
3,227,320	+		PS417_14765	0.32	+0.2
3,227,320	+		PS417_14765	0.32	+0.4
3,227,320	+		PS417_14765	0.32	+0.7
3,227,320	+		PS417_14765	0.32	-2.2
3,227,321	-				+0.3
3,227,321	-				-0.4
3,227,321	-		PS417_14765	0.32	-0.6
3,227,428	+		PS417_14765	0.40	-0.2
3,227,546	-		PS417_14765	0.49	+1.0
3,227,546	-		PS417_14765	0.49	+1.2
3,227,653	+		PS417_14765	0.57	-1.0
3,227,795	-		PS417_14765	0.68	-0.2
3,227,806	+		PS417_14765	0.69	-0.5
3,227,806	+		PS417_14765	0.69	-0.5
3,227,812	+		PS417_14765	0.70	+0.3
3,227,812	+		PS417_14765	0.70	-0.1
3,227,887	+		PS417_14765	0.75	-0.1