Strain Fitness in Pseudomonas simiae WCS417 around PS417_14305

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
3,130,323	-		PS417_14300	0.46	-0.9
3,130,458	-		PS417_14300	0.54	-0.2
3,130,509	-		PS417_14300	0.57	-3.4
3,130,509	-		PS417_14300	0.57	-0.1
3,130,509	-		PS417_14300	0.57	-0.8
3,130,509	-		PS417_14300	0.57	-0.4
3,130,536	-		PS417_14300	0.59	-0.0
3,130,536	-		PS417_14300	0.59	-0.7
3,130,536	-				-0.2
3,130,899	-		PS417_14300	0.81	-0.8
3,131,058	+				-0.1
3,131,087	+				+0.1
3,131,390	+		PS417_14305	0.19	+0.1
3,131,407	+				-1.6
3,131,677	+		PS417_14305	0.50	-1.9
3,131,908	+				+1.0
3,132,034	+		PS417_14305	0.88	-1.4
3,132,082	+				-0.1
3,132,083	-				-0.8
3,132,160	+				-2.4
3,132,319	+		PS417_14310	0.14	-0.7
3,132,592	+		PS417_14310	0.43	+0.3
3,132,592	+		PS417_14310	0.43	-0.1
3,132,605	-		PS417_14310	0.44	-0.0
3,132,776	+		PS417_14310	0.62	+0.3
3,132,973	+		PS417_14310	0.83	-1.8
3,132,974	-		PS417_14310	0.83	+0.1
3,132,976	+		PS417_14310	0.83	+0.3
3,132,976	+		PS417_14310	0.83	-0.1
3,132,976	+		PS417_14310	0.83	-1.3
3,132,977	-		PS417_14310	0.83	-0.2
3,132,977	-		PS417_14310	0.83	+0.7
3,133,013	-		PS417_14310	0.87	+0.2