Strain Fitness in Pseudomonas simiae WCS417 around PS417_11965

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
2,603,998	-		PS417_11955	0.87	-0.1
2,604,036	+		PS417_11955	0.88	-0.6
2,604,091	-				-0.3
2,604,142	-				+0.3
2,604,246	+				+0.3
2,604,247	-				+0.4
2,604,261	+				+0.0
2,604,262	-				-1.0
2,604,262	-				-0.7
2,604,267	+				+0.1
2,604,318	+				-0.3
2,604,560	+		PS417_11960	0.27	-0.1
2,604,560	+		PS417_11960	0.27	-0.2
2,604,560	+		PS417_11960	0.27	-0.2
2,604,560	+		PS417_11960	0.27	-0.7
2,604,560	+		PS417_11960	0.27	+0.2
2,604,561	-		PS417_11960	0.28	-0.7
2,604,561	-		PS417_11960	0.28	+0.1
2,604,561	-		PS417_11960	0.28	+0.7
2,604,561	-		PS417_11960	0.28	-0.3
2,604,561	-		PS417_11960	0.28	+2.8
2,604,713	+		PS417_11960	0.74	+0.8
2,604,714	-		PS417_11960	0.74	-0.1
2,604,780	-				+0.3
2,604,806	-				-0.2
2,604,884	-				+0.8
2,604,884	-				-0.6
2,604,892	-				-1.0
2,605,172	-		PS417_11965	0.56	+0.4
2,605,223	+		PS417_11965	0.67	+0.5
2,605,676	+				+1.2
2,605,785	-				+0.9
2,605,813	-				+1.6
2,605,845	-				+0.2
2,605,938	-				-0.7
2,606,203	-				+1.6
2,606,203	-		PS417_11975	0.34	-1.3
2,606,239	-		PS417_11975	0.38	-0.0
2,606,258	+		PS417_11975	0.40	+0.3
2,606,259	-		PS417_11975	0.40	-0.4
2,606,302	+		PS417_11975	0.44	+0.7