Strain Fitness in Pseudomonas simiae WCS417 around PS417_11620

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
2,498,456	-		PS417_11615	0.34	-0.4
2,498,506	-		PS417_11615	0.42	-0.7
2,498,931	+				-0.1
2,499,039	-				+1.2
2,499,039	-				-0.2
2,499,065	+				+0.2
2,499,066	-				+0.3
2,499,144	+				-0.1
2,499,144	+				-0.1
2,499,210	-		PS417_11620	0.12	+1.6
2,499,290	+		PS417_11620	0.19	+0.7
2,499,291	-		PS417_11620	0.19	+0.7
2,499,299	-		PS417_11620	0.20	+0.6
2,499,415	-		PS417_11620	0.29	+0.9
2,499,418	-		PS417_11620	0.29	+0.3
2,499,507	+		PS417_11620	0.36	-0.1
2,499,524	+		PS417_11620	0.38	+0.5
2,499,840	+		PS417_11620	0.63	+0.3
2,499,841	-		PS417_11620	0.63	+0.1
2,499,844	-		PS417_11620	0.64	-0.0
2,499,888	+		PS417_11620	0.67	-0.4
2,499,936	+		PS417_11620	0.71	-0.5
2,499,936	+		PS417_11620	0.71	+0.1
2,499,937	-		PS417_11620	0.71	-0.1
2,500,067	+		PS417_11620	0.82	+1.4
2,500,077	+		PS417_11620	0.82	-0.1
2,500,121	-		PS417_11620	0.86	+0.4
2,500,130	-		PS417_11620	0.87	-2.2
2,500,312	-				-0.4
2,500,408	+				+0.2
2,500,431	+				-0.2
2,500,431	+				-0.2
2,500,431	+				-0.2
2,500,932	+		PS417_11625	0.41	-0.7
2,500,933	-		PS417_11625	0.41	+0.3
2,500,933	-		PS417_11625	0.41	-0.3
2,501,045	+		PS417_11625	0.49	+0.0
2,501,046	-		PS417_11625	0.49	-0.0