Strain Fitness in Pseudomonas simiae WCS417 around PS417_09790

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
2,121,737	+				-2.5
2,121,738	-				-0.1
2,121,801	+				+0.1
2,121,802	-				-0.4
2,121,998	+		PS417_09785	0.16	+0.4
2,122,078	-		PS417_09785	0.26	-0.1
2,122,078	-		PS417_09785	0.26	-0.5
2,122,092	+		PS417_09785	0.27	-0.9
2,122,304	+		PS417_09785	0.53	-1.0
2,122,427	-		PS417_09785	0.67	-0.7
2,122,436	+		PS417_09785	0.68	-0.8
2,122,450	-		PS417_09785	0.70	+0.3
2,122,450	-		PS417_09785	0.70	-0.5
2,122,450	-		PS417_09785	0.70	-0.6
2,122,697	+				-0.6
2,123,000	+		PS417_09790	0.40	-0.7
2,123,004	+		PS417_09790	0.40	-0.2
2,123,004	+				-0.7
2,123,005	-		PS417_09790	0.40	+0.6
2,123,005	-		PS417_09790	0.40	+1.0
2,123,005	-		PS417_09790	0.40	+0.1
2,123,005	-		PS417_09790	0.40	+0.3
2,123,005	-		PS417_09790	0.40	+0.7
2,123,005	-		PS417_09790	0.40	+0.6
2,123,028	-		PS417_09790	0.43	-0.4
2,123,254	+		PS417_09790	0.72	+0.9
2,123,355	-		PS417_09790	0.85	+0.7
2,123,360	+		PS417_09790	0.86	+2.1
2,123,360	+		PS417_09790	0.86	+0.4
2,123,521	+				-2.3
2,123,612	+				+0.7
2,123,613	-				-0.5
2,123,627	-				-0.8
2,123,643	-				+0.7
2,123,680	-				-0.2
2,123,686	+				-0.3
2,123,687	-				+0.4
2,123,707	-		PS417_09795	0.10	-0.6
2,123,726	+		PS417_09795	0.11	+0.0
2,123,726	+		PS417_09795	0.11	-0.5
2,123,748	-				+1.9
2,123,751	+		PS417_09795	0.12	-0.4
2,123,854	+		PS417_09795	0.17	+0.2
2,123,854	+		PS417_09795	0.17	-0.3
2,123,854	+		PS417_09795	0.17	-0.6
2,123,886	-		PS417_09795	0.19	+0.6
2,124,021	+		PS417_09795	0.25	-1.6
2,124,022	-		PS417_09795	0.25	-1.4
2,124,159	-		PS417_09795	0.31	+0.1
2,124,238	-		PS417_09795	0.35	+0.0
2,124,238	-		PS417_09795	0.35	-0.5
2,124,369	+		PS417_09795	0.41	-0.0
2,124,369	+		PS417_09795	0.41	-0.1
2,124,369	+		PS417_09795	0.41	-0.1
2,124,370	-		PS417_09795	0.41	-0.1
2,124,370	-		PS417_09795	0.41	-0.8
2,124,370	-		PS417_09795	0.41	-0.0
2,124,372	-		PS417_09795	0.41	+0.3