Strain Fitness in Pseudomonas simiae WCS417 around PS417_00825

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
181,461	-		PS417_00820	0.83	+0.5
181,478	+		PS417_00820	0.89	-2.1
181,498	+				-1.2
181,499	-				+0.1
181,562	+				-1.7
181,562	+				-0.1
181,593	+				+0.5
181,745	+				-0.1
181,785	+				-0.5
181,785	+				+0.3
181,785	+				-0.2
181,786	-				+0.4
181,887	+				-0.7
181,942	+				+0.7
181,942	+				-0.5
181,942	+				+2.0
181,943	-				+0.2
181,943	-				+0.6
181,943	-				-0.5
182,021	+				+1.9
182,095	-				+0.1
182,095	-				-0.4
182,127	+				-0.1
182,145	+				+0.0
182,154	-				-1.4
182,154	-				-2.3
182,154	-				+0.2
182,230	-				+0.9
182,230	-				+0.2
182,230	-				-1.0
182,230	-				+0.7
182,306	+				+0.4
182,306	+				+0.2
182,328	-				+0.3
182,362	+				-0.8
182,362	+				+0.2
182,363	-				+0.3
182,363	-				+1.3
182,389	-				+0.5
182,639	-		PS417_00825	0.21	+0.7
182,695	+		PS417_00825	0.26	+1.3
182,736	+		PS417_00825	0.29	+0.4
183,253	-		PS417_00825	0.73	+0.3
183,683	-		PS417_00830	0.15	+0.1
183,695	-		PS417_00830	0.17	-0.1
183,697	+		PS417_00830	0.17	+0.2
183,737	+				-0.7
184,121	-		PS417_00830	0.74	+0.7
184,121	-		PS417_00830	0.74	+0.2
184,261	-				-0.0
184,261	-				+1.0
184,355	+				+0.4
184,355	+				+0.3
184,356	-				+0.3
184,359	+				+0.3
184,382	-				+0.3
184,501	+				-0.4