Strain Fitness in Pseudomonas simiae WCS417 around PS417_07890

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
1,727,600	+				-0.2
1,727,706	+		PS417_07885	0.17	+1.5
1,727,952	+		PS417_07885	0.45	-0.0
1,728,156	-		PS417_07885	0.68	+1.4
1,728,158	+		PS417_07885	0.68	+0.5
1,728,159	-		PS417_07885	0.68	+0.3
1,728,184	+		PS417_07885	0.71	+0.3
1,728,185	-		PS417_07885	0.71	+0.6
1,728,198	-		PS417_07885	0.73	-0.4
1,728,617	-				-2.8
1,728,748	+		PS417_07890	0.17	+2.0
1,728,816	+		PS417_07890	0.21	+0.5
1,729,078	+		PS417_07890	0.35	+0.4
1,729,835	+				-3.7
1,730,192	+				+0.3
1,730,192	+				+0.4
1,730,197	+				+0.7
1,730,272	+				+0.7
1,730,272	+				-1.3
1,730,272	+				+0.4
1,730,273	-				-2.1
1,730,286	+				+0.8
1,730,325	-				+0.6
1,730,330	-				+0.2
1,730,338	+				-0.1
1,730,338	+				-1.5
1,730,338	+				-0.7
1,730,338	+				-0.1
1,730,339	-				-0.7
1,730,339	-				-0.0
1,730,434	-				+0.1
1,730,452	-				-0.3
1,730,452	-				-0.1
1,730,632	+		PS417_07895	0.36	-0.4
1,730,633	-		PS417_07895	0.36	+0.4
1,730,779	+		PS417_07895	0.87	+0.2
1,730,779	+		PS417_07895	0.87	+0.4
1,730,780	-		PS417_07895	0.88	+0.6
1,730,814	-				+0.1
1,730,830	+				-0.5
1,730,830	+				+0.4
1,730,830	+				-0.7
1,730,830	+				+0.3
1,730,831	-				-0.8
1,730,831	-				-0.1
1,731,132	+				+0.5
1,731,133	-				-1.1
1,731,147	+				+0.8
1,731,165	-				-1.0
1,731,240	+				+0.1
1,731,240	+				-0.9