Strain Fitness in Pseudomonas simiae WCS417 around PS417_07595

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
1,672,707	+				-1.2
1,672,857	+				-0.5
1,672,857	+				+0.4
1,672,858	-				-1.5
1,672,858	-				-1.1
1,672,875	+				-0.7
1,672,875	+				-2.5
1,672,875	+				-1.1
1,672,875	+				+0.2
1,672,876	-				-0.2
1,672,876	-				+0.2
1,672,876	-				-0.5
1,672,960	-				-0.5
1,672,985	+				-1.1
1,673,029	-				+0.9
1,673,066	+				-0.5
1,673,066	+				-0.4
1,673,066	+				-0.2
1,673,066	+				+0.5
1,673,067	-				-0.6
1,673,067	-				-1.0
1,673,104	-		PS417_07595	0.10	-1.0
1,673,240	+		PS417_07595	0.36	-0.3
1,673,241	-		PS417_07595	0.36	-0.8
1,673,393	-		PS417_07595	0.66	-0.6
1,673,410	+		PS417_07595	0.69	-1.1
1,673,410	+		PS417_07595	0.69	-0.1
1,673,706	+				+0.2
1,673,706	+				+1.0
1,673,706	+				+0.2
1,673,708	+				+0.2
1,673,709	-				+0.1
1,673,739	+				+0.3
1,673,740	-				-0.1
1,673,740	-				-0.9
1,674,090	+				-1.1
1,674,090	+				+0.4
1,674,091	-				-0.8
1,674,091	-				-1.1
1,674,094	+				-0.4
1,674,094	+				+0.5
1,674,107	+				-2.3
1,674,108	-				-0.2
1,674,108	-				-1.2