Strain Fitness in Pseudomonas simiae WCS417 around PS417_05410

Experiment: Vogels_fungal_media; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vogels_fungal_media; pH 5.5
1,212,211	-		PS417_05405	0.51	+0.6
1,212,256	+		PS417_05405	0.54	+0.3
1,212,257	-		PS417_05405	0.54	+0.1
1,212,445	+		PS417_05405	0.68	+0.8
1,212,805	+				+1.6
1,212,805	+				-0.8
1,212,806	-				+0.9
1,212,806	-				-0.9
1,212,806	-				-0.3
1,212,806	-				-0.3
1,212,847	+				-0.1
1,212,847	+				-0.2
1,212,848	-				+0.3
1,213,025	-				+0.9
1,213,051	-				-0.3
1,213,051	-				+0.1
1,213,292	+		PS417_05410	0.25	+1.5
1,213,353	-		PS417_05410	0.31	+0.1
1,213,628	+				-0.1
1,213,628	+		PS417_05410	0.55	+0.5
1,213,891	-		PS417_05410	0.78	+0.5
1,213,891	-		PS417_05410	0.78	-1.3
1,213,902	-		PS417_05410	0.79	+1.5
1,214,165	-				-0.2
1,214,175	+				+0.3
1,214,207	-				-0.1
1,214,250	-				+0.1
1,214,250	-				-0.8