Strain Fitness in Pseudomonas simiae WCS417 around PS417_04690

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
1,039,413	+		PS417_04685	0.40	-1.2
1,039,414	-		PS417_04685	0.40	-0.9
1,039,527	+		PS417_04685	0.49	-0.8
1,039,528	-		PS417_04685	0.49	+0.0
1,039,944	+		PS417_04685	0.79	+0.8
1,039,945	-		PS417_04685	0.79	+0.1
1,039,950	+		PS417_04685	0.80	-1.1
1,039,950	+				+2.4
1,039,951	-		PS417_04685	0.80	+0.2
1,040,218	+				-0.9
1,040,218	+				+0.3
1,040,219	-				-0.9
1,040,245	+				+1.3
1,040,245	+				+0.9
1,040,245	+				+1.2
1,040,245	+				+1.2
1,040,246	-				+1.6
1,040,748	+		PS417_04690	0.78	+1.6
1,040,761	+		PS417_04690	0.80	+1.1
1,040,762	-		PS417_04690	0.80	+0.7
1,040,821	+		PS417_04690	0.89	+1.0
1,040,822	-		PS417_04690	0.89	+1.1
1,040,985	-				+0.8
1,040,990	+				+0.1
1,040,990	+				+0.3
1,040,990	+				+0.4
1,040,990	+				+2.1
1,040,991	-				+0.2
1,040,991	-				-0.0
1,040,991	-				+0.4
1,040,992	+				-0.3
1,040,993	-				+0.3
1,040,993	-				+1.2
1,041,174	-				+0.6
1,041,392	+		PS417_04695	0.15	-2.1
1,041,408	+		PS417_04695	0.16	-0.8
1,041,413	+		PS417_04695	0.16	+0.6
1,041,414	-		PS417_04695	0.16	+1.5
1,041,716	+		PS417_04695	0.26	-0.9
1,041,773	+		PS417_04695	0.27	-0.6