Strain Fitness in Pseudomonas simiae WCS417 around PS417_27665

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
5,965,317	+		PS417_27660	0.37	-1.2
5,965,317	+		PS417_27660	0.37	-1.2
5,965,318	-		PS417_27660	0.37	-0.1
5,965,318	-		PS417_27660	0.37	+0.0
5,965,318	-		PS417_27660	0.37	+1.3
5,965,434	+		PS417_27660	0.45	+0.0
5,965,452	-		PS417_27660	0.47	-0.7
5,965,452	-		PS417_27660	0.47	-1.0
5,965,452	-		PS417_27660	0.47	-0.2
5,965,456	-				-1.8
5,965,456	-		PS417_27660	0.47	+0.5
5,965,503	+		PS417_27660	0.50	-0.4
5,965,548	+		PS417_27660	0.53	+0.3
5,966,002	-				+1.5
5,966,169	+				-0.6
5,966,170	-				+0.1
5,966,208	+				-0.1
5,966,308	+				-0.1
5,966,309	-				-0.4
5,967,642	+		PS417_27665	0.83	-1.0
5,967,643	-		PS417_27665	0.83	-1.3
5,967,643	-		PS417_27665	0.83	-0.8
5,967,643	-		PS417_27665	0.83	-0.7
5,967,643	-		PS417_27665	0.83	-0.7
5,967,643	-		PS417_27665	0.83	-0.2
5,967,709	-		PS417_27665	0.87	-1.3
5,967,935	+				-0.4
5,967,935	+				+0.7
5,967,936	-				-0.6
5,967,936	-				-0.3
5,967,943	+				+0.5
5,967,976	-				+0.3
5,968,047	+				-0.2
5,968,090	-				+1.2
5,968,102	-				-0.0