Strain Fitness in Pseudomonas simiae WCS417 around PS417_26615

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
5,752,011	+				+0.0
5,752,255	+		PS417_26610	0.80	-0.1
5,752,255	+				+1.1
5,752,256	-		PS417_26610	0.80	-1.1
5,752,304	-				+0.6
5,752,419	+		PS417_26615	0.13	-0.7
5,752,419	+		PS417_26615	0.13	-1.9
5,752,420	-		PS417_26615	0.13	-1.2
5,752,420	-				+0.1
5,752,607	+		PS417_26615	0.35	-1.2
5,752,609	+		PS417_26615	0.35	+1.4
5,752,610	-		PS417_26615	0.35	-2.4
5,752,610	-		PS417_26615	0.35	-0.8
5,753,179	+				+1.1
5,753,396	+		PS417_26620	0.15	-0.9
5,753,398	+		PS417_26620	0.15	-0.2
5,753,398	+		PS417_26620	0.15	+0.0
5,753,398	+		PS417_26620	0.15	-1.2
5,753,399	-		PS417_26620	0.15	+0.1
5,753,399	-				+0.6
5,753,399	-		PS417_26620	0.15	+0.3
5,753,404	+		PS417_26620	0.15	+1.2
5,753,857	+		PS417_26620	0.42	-0.1
5,753,857	+		PS417_26620	0.42	+0.0
5,753,858	-		PS417_26620	0.42	-0.3
5,753,858	-		PS417_26620	0.42	-0.2
5,753,858	-		PS417_26620	0.42	-0.9
5,754,010	-		PS417_26620	0.52	-0.6