Strain Fitness in Pseudomonas simiae WCS417 around PS417_24915

Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X
5,398,586	-				+0.0
5,398,658	+		PS417_24905	0.21	+1.3
5,398,658	+		PS417_24905	0.21	-0.9
5,398,659	-		PS417_24905	0.22	-1.2
5,398,659	-		PS417_24905	0.22	-0.4
5,398,659	-		PS417_24905	0.22	-0.5
5,398,665	+		PS417_24905	0.23	-0.7
5,398,666	-		PS417_24905	0.24	+0.2
5,398,720	-		PS417_24905	0.39	-0.3
5,398,776	-				+0.2
5,398,868	+		PS417_24905	0.82	+0.9
5,398,868	+		PS417_24905	0.82	+2.3
5,398,868	+		PS417_24905	0.82	-1.5
5,398,869	-		PS417_24905	0.83	-0.1
5,398,869	-		PS417_24905	0.83	+0.0
5,398,869	-		PS417_24905	0.83	+0.5
5,398,913	+				+0.0
5,398,914	-				+0.4
5,399,039	+				-0.4
5,399,039	+				+0.7
5,399,039	+				-0.9
5,399,039	+				-1.5
5,399,040	-				-1.4
5,399,073	-				+0.3
5,399,099	+				-0.6
5,399,099	+				+0.2
5,399,100	-				+1.0
5,399,103	+				+0.2
5,399,104	-				-0.2
5,399,139	-				-1.4
5,399,237	+				+0.1
5,399,237	+				-0.7
5,399,273	+				-1.2
5,399,273	+				+0.0
5,399,275	+				+0.4
5,399,275	+				-0.9
5,399,275	+				+0.2
5,399,275	+				-0.6
5,399,276	-				+0.2
5,399,276	-				+0.0
5,399,276	-				+0.0
5,399,276	-				+0.8
5,399,276	-				+2.3
5,399,276	-				-0.5
5,399,445	+				-0.4
5,399,469	+				-1.0
5,399,517	-				-0.3
5,399,664	+		PS417_24915	0.30	+0.7
5,399,683	+		PS417_24915	0.35	-0.8
5,399,684	-		PS417_24915	0.35	-0.3
5,399,838	+		PS417_24915	0.76	+0.0
5,399,878	-		PS417_24915	0.86	+2.1
5,399,886	+		PS417_24915	0.88	+0.1
5,399,886	+		PS417_24915	0.88	+0.2
5,399,887	-		PS417_24915	0.89	+1.1
5,399,891	-		PS417_24915	0.90	+0.2
5,399,891	-		PS417_24915	0.90	+1.0
5,399,891	-		PS417_24915	0.90	+0.6
5,399,891	-				+2.3
5,399,891	-		PS417_24915	0.90	+0.5
5,399,891	-		PS417_24915	0.90	-0.2
5,399,893	-				-0.4
5,399,893	-				-0.2
5,399,893	-				-0.7
5,399,898	+				+0.6
5,399,898	+				-0.5
5,399,898	+				+0.1
5,399,946	-				+1.0
5,399,971	-				-0.4
5,400,169	-				-1.3
5,400,169	-				+1.3
5,400,229	+				-0.0
5,400,229	+				-1.3
5,400,239	-				-0.1
5,400,364	+				-0.0
5,400,517	-				+0.1
5,400,521	-				+0.4
5,400,534	+				-0.4
5,400,534	+				+1.0
5,400,547	+				-0.3
5,400,643	+				+0.1
5,400,701	+				-0.1
5,400,702	-				-0.3
5,400,923	+				+0.5